Definition Sphingomonas wittichii RW1 chromosome, complete genome.
Accession NC_009511
Length 5,382,261

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 148553945

GI number:

Start: 1138728

End: 1140881

Strand: Reverse

Name: Not Available

Synonym: Swit_1022

Alternate gene names: NA

Gene position: NA

Preceding gene: 148553946

Following gene: 148553944

Centisome position: NA

GC content: NA

Gene sequence:

>2154_bases
ATGATCACCAAAACCATGCTTTCGCTGTCGGTCGCCGCGGGCGCGCTGTTCGCCGCCGCGCCGGCCTTCGCCCAGGCCGA
TGCGCCGCAAGCCGCCGCCGAGACCGCCGACCAGGGTGGCTTCGGCGACATCATCGTCACCGCGCAGCGCCGCGAGCAGC
GGCTGCAGGACGTGCCCGTCTCGGTCACCGCGCTGACCGGCGAGCAGCTCACCGGGCAGGGCGTCACCTCGACCCACGAC
ATCGCCCAGTCGATCACCGGCATGACGATCACCGAGAGCGGCGGCTATGTGCAGCCCTTCATCCGTGGCGTCGGATCGAC
CGTCACCAACCTCGGCGAGCCGGGATCGGCGGCCTTCTACATCGACGGCGTCTACATGCCGACCGTCAACGGCCAGCTCT
ACCAGCTCGCCAACGTCGAATCGATCCAGGTGCTGAAGGGGCCGCAGGGCACGCTGTTCGGCCGCAACGCCAACACCGGC
GCGATCATCATCACCACCAAGCAGCCGCAGTTCACGCCCGCGGGCTCGTTCAGCGCCAGCTACGGCAATTACAACTCGTT
CGTCGGCAGCGGCTTCGTCACCGGCCCGGTCTCCGACACGATCGCGGTGTCGCTGGCCGGCAATTACGACCGCCACGACG
GCTGGTTCAAGAACAGGAACCCGGCCAACGGCCTGGGCAAGCGCGTCGGCGATTCCAAACGCTGGACGATTCGCGGCAAT
GTCCTGATCAAGGCGAGCGACAATCTCGACATCACCCTGTCGGGCGACGCGATGGACATCAACGACGCCAGCCCGATCAT
CATCCAGCCGATCGACCGCTATCAGGGCTATGTCCCCGGCGCGCTGCTGCCGACCGGGCCCTATGACTATATCGGCAACG
AGAAGGTCGGCTACAAGGTCGAGCAGCAGGGCGCGTCGGGCAAGCTCGACTGGGATCTCGGCGGCGTGAAGCTGGTCTCG
ACGACCGCGTGGCGCCATTATGAGAACCATTCGATCGACTATGACTCGGACACCACGCCGTTCCGCTACTCGCAGATCAA
CAACAACGACGTCGGCAACAACTTCACCCAGGAAATCCTGCTCAACTCGGACAACAAGAGCAATTTCTCCTGGGTGCTCG
GCGGCTTCTACCTGCGCCAGAACGGCAAGCTCGACCCGCTCTACGTGCTGTCGGGGACGACGCTGACGACGATCGCGGTC
AAGCAGATCACCGACGCCTATGCGGTCTTCGCCGACGGGACGCTGACGCTCGGCCGGTTCGACCTGACCGGCGGCATCCG
CTACAGCTATGAGAAGAAGGTGATCACCGGATCGCTCAACGGCATCCAGCGGCTCGACCATGTCAAGGCGAGCTGGGATT
CGTTCACGCCGCGCGCGGTGCTGGCCTATCATCCGACCGACGACATGATGTTCTACGGAAGCTTCTCCAAGGGCTTCAAG
AGCGGCGCGTTCAACGCCAACGCGCTGTCGCCGGTGCCGATCGATCCCGAGAAGGTCGACGCCTATGAGATCGGCGGCAA
GCTGACCCTGGGCCGCGGCTTCACCGTCAACGTCGCGGGCTTCCACTACAAGACCAAGGACCTGCAGGTGCAGGCGCTCA
ACCCGATCACCAACCTGATCGAGCTGCGCAACGCCGCGTCGGTCAAGTCGGACGGCGTCGACCTCGACGTCGTGTTCGCG
CCGACCCGCAAATGGTCGATCAAGTTCGGCGCCTCCTATCTGAAGGCGAAATTCTCGAAGTTCACCAATGCGCAGGTGTT
CCTGCCGGTGCCGGGCGGCGATGGACGCAACGCGTCGGCGATCGTCGACGTGACGGGCAAGCGCAACGTGCGGTCGCCCG
ACTGGACGCTCAACTGGGCGGTCGACTATACGATCGACCTGCCGGGCGGCGGGACGCTCGTCCCCTCGGGCAACGTCTAT
TATTCGTCCAAATTCTACTGGACGGTCGACAACCGCATCTCCGAGCCGCAGCATGTCGTGATCAACGCCAGCCTGACCTG
GAACCTGCCGGGCGACCGCTTCTCGGTCACGGCGTTCGGCCGGAACATCACCGACGAGCTGCGCTTCCGCAACGTCTCCG
CCTCGGCCCAGGCCGACCGGCGCGCGGCGGACGAGCCGGCGCTCTACGGCGTCCGCGCCTCGTACAAGTTCTGA

Upstream 100 bases:

>100_bases
ATCGATAGGTTATTTCCCAAGGCGCTCAACTGAGGCGCCGGGAGAAGGCGGCCCCTGCGGGAGCCCGGCCGCCGCTTTCG
AGGGTAGGGGAGACCTGACG

Downstream 100 bases:

>100_bases
TCGTCACCGGGCGGGGATCGCAAGGCCCCCGCCCATGTCTTCGAGGGTGTCGGCGCGGTGAGCGGTTCCAGGGATATCGA
TCACCATGCCGTCGCCTTCG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>717_residues
MITKTMLSLSVAAGALFAAAPAFAQADAPQAAAETADQGGFGDIIVTAQRREQRLQDVPVSVTALTGEQLTGQGVTSTHD
IAQSITGMTITESGGYVQPFIRGVGSTVTNLGEPGSAAFYIDGVYMPTVNGQLYQLANVESIQVLKGPQGTLFGRNANTG
AIIITTKQPQFTPAGSFSASYGNYNSFVGSGFVTGPVSDTIAVSLAGNYDRHDGWFKNRNPANGLGKRVGDSKRWTIRGN
VLIKASDNLDITLSGDAMDINDASPIIIQPIDRYQGYVPGALLPTGPYDYIGNEKVGYKVEQQGASGKLDWDLGGVKLVS
TTAWRHYENHSIDYDSDTTPFRYSQINNNDVGNNFTQEILLNSDNKSNFSWVLGGFYLRQNGKLDPLYVLSGTTLTTIAV
KQITDAYAVFADGTLTLGRFDLTGGIRYSYEKKVITGSLNGIQRLDHVKASWDSFTPRAVLAYHPTDDMMFYGSFSKGFK
SGAFNANALSPVPIDPEKVDAYEIGGKLTLGRGFTVNVAGFHYKTKDLQVQALNPITNLIELRNAASVKSDGVDLDVVFA
PTRKWSIKFGASYLKAKFSKFTNAQVFLPVPGGDGRNASAIVDVTGKRNVRSPDWTLNWAVDYTIDLPGGGTLVPSGNVY
YSSKFYWTVDNRISEPQHVVINASLTWNLPGDRFSVTAFGRNITDELRFRNVSASAQADRRAADEPALYGVRASYKF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA