| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381540
Identifier: 148381540
GI number: 148381540
Start: 3845069
End: 3845995
Strand: Reverse
Name: 148381540
Synonym: CBO3602
Alternate gene names: NA
Gene position: 3845995-3845069 (Counterclockwise)
Preceding gene: 148381541
Following gene: 148381539
Centisome position: 98.95
GC content: 34.95
Gene sequence:
>927_bases ATGAAGAAATCCATATTTTCTCATATGGTTGGAATAAAATATCCTATTATTCAAGGTGGAATGGCATGGATTGCTGATAG TTCACTAGCAGCGGCAGTTTCTAATGCAGGAGGTCTTGGAATAATAACAGGAAATGCTCCAGTAGAATGGGTTAGACAAG AAATAAGAAAGACAAAAGAATTAACAGATAAGCCCTTTGGAGTAAATATAATGCTTTTAGCAGAAACAGCAGATGAAATA GCCCAAATGGTTTGTGATGAGGGAGTAAAAGTAGTTACTACTGGAGCAGGTAATCCAGGAAAGTATATAAAAAAATGGAA AGAACATGGCATAATCGTAATACCTGTAGTTCCTTCTGTAGCTTTGGCTAAGAGAATGGAAAAATCAGGGGCAGATGCCA TAATAGCAGAAGGTTGTGAATCTGGTGGTCATGTAGGGGAATTGACAACAATGACATTGATACCACAGGTAGTTGATGCT GTAGATATACCTGTTATAGCAGCTGGAGGAATAGGTGATGGAAGAGGTATAGCAGCTAGTTTTATGTTAGGAGCAGATGC TGTTCAAGTAGGTACTAGATTTTTAGTAGCAAAAGAATGTACTGTTCATCAAAATTATAAAAATAAAGTTATGAAAGCTA AGGATATAGATACACAAGTTACAGGTAGACCTACAGGACACCCTGTTAGAATTATAAGAAATAGGTTATCTAGAAAGTTT CAAATACTAGAAAAAGAAGGAGCTCCTTTAGAAGAATTTGAAAAATTAGGTAGGGGAGCATTAAGCAAAGCTGTAATAGA GGGAGATATTGATAATGGTTCTGTTATGGCAGGTCAAATTGCAGGACTTATAAATAAGGAACAAACTTGTAGTGAAATTA TAAATGAAATATTTGATGAAGCATATACACTATTAGATTATAAATAA
Upstream 100 bases:
>100_bases AAAATGGTCCACAAAATTAAATTTTAAAAACAAATTAATTATAGCACATAAACATTTAATAATAAACTATCGATTTAAGA TTCTAGGAGGAATTAAAACT
Downstream 100 bases:
>100_bases TATTTATTTTGGAGGATATTATGTCAAAGATAGCTTTTATATTCTCAGGTCAAGGAGCTCAATATGTAGGTATGGGGAAA GATTTATATAAAAATATTCC
Product: oxidoreductase, 2-nitropropane dioxygenase family
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNRLSRKF QILEKEGAPLEEFEKLGRGALSKAVIEGDIDNGSVMAGQIAGLINKEQTCSEIINEIFDEAYTLLDYK
Sequences:
>Translated_308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNRLSRKF QILEKEGAPLEEFEKLGRGALSKAVIEGDIDNGSVMAGQIAGLINKEQTCSEIINEIFDEAYTLLDYK >Mature_308_residues MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKELTDKPFGVNIMLLAETADEI AQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSVALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDA VDIPVIAAGGIGDGRGIAASFMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNRLSRKF QILEKEGAPLEEFEKLGRGALSKAVIEGDIDNGSVMAGQIAGLINKEQTCSEIINEIFDEAYTLLDYK
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=166, Percent_Identity=29.5180722891566, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 32913; Mature: 32913
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCHH ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNRLSRKF HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHH QILEKEGAPLEEFEKLGRGALSKAVIEGDIDNGSVMAGQIAGLINKEQTCSEIINEIFDE HHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH AYTLLDYK HHHHHCCC >Mature Secondary Structure MKKSIFSHMVGIKYPIIQGGMAWIADSSLAAAVSNAGGLGIITGNAPVEWVRQEIRKTKE CCHHHHHHHHCCCCHHHHCCHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH LTDKPFGVNIMLLAETADEIAQMVCDEGVKVVTTGAGNPGKYIKKWKEHGIIVIPVVPSV HCCCCCCEEEEEEECCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCHH ALAKRMEKSGADAIIAEGCESGGHVGELTTMTLIPQVVDAVDIPVIAAGGIGDGRGIAAS HHHHHHHHCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHH FMLGADAVQVGTRFLVAKECTVHQNYKNKVMKAKDIDTQVTGRPTGHPVRIIRNRLSRKF HHHCCHHHHHHHHHEEEHHHHHHCCHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHH QILEKEGAPLEEFEKLGRGALSKAVIEGDIDNGSVMAGQIAGLINKEQTCSEIINEIFDE HHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHH AYTLLDYK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]