| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148381377
Identifier: 148381377
GI number: 148381377
Start: 3677487
End: 3678227
Strand: Reverse
Name: 148381377
Synonym: CBO3437
Alternate gene names: NA
Gene position: 3678227-3677487 (Counterclockwise)
Preceding gene: 148381378
Following gene: 148381376
Centisome position: 94.63
GC content: 24.7
Gene sequence:
>741_bases ATGTTAAAAAATAAGAAGATAGCACTAATACTAATTACCTTAATAATTTTTAGTTTTTCAATAGGATGTACTAAGGAGAA TAAGTCATCAGTTGAAAATACTAAGCAAGAAGAACAAAAGGTAGAATATAATAATAATGATAAAGAAGAGAAAGATAAGA AGAATAATACTGAAGCTAAAAATGAAGAAAAGAAGGATGAAAAAGAAGTTTCAGAAAAAACAAATTTTTCTAAAGTAGAA AAAGAAGAGATAGTAGATAAAAAGTTCCAAGGGGAAAATAATACTGAATGGAAAGAAAGTGAGCAAAAAAAATACTCAGC TATTGTAGAAGGCAAAGGAAATAATGGAGAAGAGGAAGGAATAGGTAAAGTTTATTTAAAAGAAAACAATACTAATAAAT TATGGTTGTTAAAAATCAATGAAATAAAAGATCAAAAAAGCCCTAAATTTTTATATTGGATAGATGATGAAAATTTATTA GTTATTATTGGGCATGGCTATGGAACAGTTTCTAAAGGTGGAAATTTATATTGTATAAATGTAAAAAATGATACTATTAC TCCAGTATACGAAGCAAAAGATAATAAACATGAAGTAATATCTGCAGAAAAGGTAAAGGATAATTCAGGGAAAACAAGCT TAATCTTAACATTAAATGTATATGAAGATGACAATTTTATTAAATCACATAAAGAAAAAATCACTATTTCTAATGATAAA GTAAAAGAATTTATTAAATAA
Upstream 100 bases:
>100_bases AAAAAGCTTCATGTTAACTTTATGTTTTCATGGAGTTTTTTTTACACAATTGATATTTTTAGATATAATTAGATATATCT ATATTTTTGGAGGGGATAAT
Downstream 100 bases:
>100_bases GAACTATAGCTAAGAGAGGAAATTTAGATGAATAATGAAGCTAAATCTAGAAAAATATATACTAAGGCTTTAGACAATTT TAATAATGGAAATATAGATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVEYNNNDKEEKDKKNNTEAKNEEKKDEKEVSEKTNFSKVE KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK VKEFIK
Sequences:
>Translated_246_residues MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVEYNNNDKEEKDKKNNTEAKNEEKKDEKEVSEKTNFSKVE KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK VKEFIK >Mature_246_residues MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVEYNNNDKEEKDKKNNTEAKNEEKKDEKEVSEKTNFSKVE KEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEGIGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLL VIIGHGYGTVSKGGNLYCINVKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK VKEFIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28365; Mature: 28365
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVEYNNNDKEEKDKKNNTEAK CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC NEEKKDEKEVSEKTNFSKVEKEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCC IGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLLVIIGHGYGTVSKGGNLYCIN CEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE VKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK ECCCCCCEEEECCCCCCCEEEHHHCCCCCCCEEEEEEEEEECCCCHHHCCCCEEEECCHH VKEFIK HHHHCC >Mature Secondary Structure MLKNKKIALILITLIIFSFSIGCTKENKSSVENTKQEEQKVEYNNNDKEEKDKKNNTEAK CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCC NEEKKDEKEVSEKTNFSKVEKEEIVDKKFQGENNTEWKESEQKKYSAIVEGKGNNGEEEG CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEECCCCCCCCCC IGKVYLKENNTNKLWLLKINEIKDQKSPKFLYWIDDENLLVIIGHGYGTVSKGGNLYCIN CEEEEEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEE VKNDTITPVYEAKDNKHEVISAEKVKDNSGKTSLILTLNVYEDDNFIKSHKEKITISNDK ECCCCCCEEEECCCCCCCEEEHHHCCCCCCCEEEEEEEEEECCCCHHHCCCCEEEECCHH VKEFIK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA