| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381345
Identifier: 148381345
GI number: 148381345
Start: 3645172
End: 3645831
Strand: Reverse
Name: 148381345
Synonym: CBO3404
Alternate gene names: NA
Gene position: 3645831-3645172 (Counterclockwise)
Preceding gene: 148381346
Following gene: 148381344
Centisome position: 93.8
GC content: 23.94
Gene sequence:
>660_bases ATGGATAACAAATATAATGATCTTTTCTATTGGGAAAATTTACTTCTAAAGAGAGAGAATGTCTGGGGTGGAAACTTTAA AGATATACCAATAAGTCCAAAATCTCTTTTTATTAACACTACCATAATAGATTATGAAAAAAATATTTTTGATAATAATT GGGCTGTATATCCAAATGTGGAATCCCTTTTGGGATTTGTAAAATATATATTTATACCTACAGTTTTCTTTTGTTATACA AATAATACCAATGAAGAAATAGTTACTCCTATAGTTTCTAAAGAAGAACTTCTAGGGGAAATAAAGACATTATGTAGAAA TGAAAATTCTATAGTTGAAATAGAATATTTTATTGATAAAGCATATAATTTATGTGAATTAAATGAATGTCATCTCATAG AAGAGTTAAAAAAGTATTGCTTAGAATTTAATAGGAAATGGGAAGAAAAAACTAGAGTATTTCATATTAGTATATATTCT AGTGGTAAAGAAATAATACAAAAAATTTCAAAAGAAGATGATTTCTTAGAAGTTATAGAGGAAGATATAGGTATGCCTAT AAATACCTTAAAAGAAATTACAAAGGATTTACATCATAACTTATTTATGAAAAATAACTTTATAAAAATTTTGAACAACC AAATAGGTTGTATAATTTAA
Upstream 100 bases:
>100_bases AACTTAAAAAATAACTTTATACACCAATTTAAAAACCATATAAAATTTATATGTAACACAAAAATTTTTTTACACAAACT TTATATAAGAGGTATGCTAT
Downstream 100 bases:
>100_bases TAATCTCATGATAAAAGTATAAAAATAAAGGATTAGATTTTCTAGTCCTTTATTTTTTATCATCTATTTTGAAATAAATC TTTAATTTTTAAATATACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDNKYNDLFYWENLLLKRENVWGGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVKYIFIPTVFFCYT NNTNEEIVTPIVSKEELLGEIKTLCRNENSIVEIEYFIDKAYNLCELNECHLIEELKKYCLEFNRKWEEKTRVFHISIYS SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII
Sequences:
>Translated_219_residues MDNKYNDLFYWENLLLKRENVWGGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVKYIFIPTVFFCYT NNTNEEIVTPIVSKEELLGEIKTLCRNENSIVEIEYFIDKAYNLCELNECHLIEELKKYCLEFNRKWEEKTRVFHISIYS SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII >Mature_219_residues MDNKYNDLFYWENLLLKRENVWGGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPNVESLLGFVKYIFIPTVFFCYT NNTNEEIVTPIVSKEELLGEIKTLCRNENSIVEIEYFIDKAYNLCELNECHLIEELKKYCLEFNRKWEEKTRVFHISIYS SGKEIIQKISKEDDFLEVIEEDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26033; Mature: 26033
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKYNDLFYWENLLLKRENVWGGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPNV CCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCEECCCH ESLLGFVKYIFIPTVFFCYTNNTNEEIVTPIVSKEELLGEIKTLCRNENSIVEIEYFIDK HHHHHHHHHHHHHHHEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHH AYNLCELNECHLIEELKKYCLEFNRKWEEKTRVFHISIYSSGKEIIQKISKEDDFLEVIE CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHH EDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure MDNKYNDLFYWENLLLKRENVWGGNFKDIPISPKSLFINTTIIDYEKNIFDNNWAVYPNV CCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCEECCCH ESLLGFVKYIFIPTVFFCYTNNTNEEIVTPIVSKEELLGEIKTLCRNENSIVEIEYFIDK HHHHHHHHHHHHHHHEEEEECCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHH AYNLCELNECHLIEELKKYCLEFNRKWEEKTRVFHISIYSSGKEIIQKISKEDDFLEVIE CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHCCCCHHHHHHH EDIGMPINTLKEITKDLHHNLFMKNNFIKILNNQIGCII HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA