| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is aegA [H]
Identifier: 148381247
GI number: 148381247
Start: 3514866
End: 3516251
Strand: Reverse
Name: aegA [H]
Synonym: CBO3304
Alternate gene names: 148381247
Gene position: 3516251-3514866 (Counterclockwise)
Preceding gene: 148381248
Following gene: 148381246
Centisome position: 90.46
GC content: 35.64
Gene sequence:
>1386_bases ATGGATAGAATGAAAAGGGTGTCAGTAAAAGAACAAGATCCTAATAAGAGAATTACAAACTTTGATGAGGTTTGTTTAGG ATATACAGAAGAAGACGCTATAGAAGAAGCCAAAAGATGTCTTCATTGTAAAAAGCCTATGTGTGTTGGAAAGTGTCCTG TAAGCGTTAATATACCAGAATTTATAGAACATATTAAAGAAGGAGAGTTTGAAAAAGCAGCTAAGGCAATAGCAAAAGAT AGTGCATTGCCAGCAGTTTGTGGAAGAGTGTGTCCTCAAGAAACTCAATGTGAAGGTAAATGTGTTCTTGGAATAAAGGG AGAACCAGTAGCTATAGGCAAATTGGAAAGGTTTGTAGCAGATTGGTCAAGAAAAAATAACGTGGATTTAAGTAGTACAG AAGAAAAGAAAAATAAAAAAGTAGCTGTAATAGGAAGTGGTCCTGCAGGGCTTACCTGTGCAGGAGATTTGGCTAAAAAA GGATATGATGTTACTATATTTGAAGCTTTACACGAACCAGGTGGCGTATTAGTCTATGGTATACCAGAATTTAGATTACC CAAGGATACAGTAGTAAAGCATGAAATAGACAATGTTAAAAAATTAGGAGTTAAAATAGAAACTAATGTAATAGTTGGAA GAACTGTAACTATTGATGATTTAGTAGAAGAAGAAGATTTTCAAGCTATATTTATAGGTTCCGGAGCAGGACTCCCAAAA TTTATGGGGATACCAGGAGAAAATTTAAACGGAGTATTCTCTGCTAATGAATTTTTAACAAGAACTAATCTTATGAAAGC CTTTAAAGAAGAATATGATACGCCTATTAAAGTAGGAGAAAAAGTTGCTGTAGTTGGTGGTGGAAATGTTGCTATGGATG CTGCAAGAACTGCCAAAAGACTTGGAGCCGAAGTATATATAGTTTATAGAAGATCAGAATCAGAACTACCAGCTAGAGTA GAAGAGGTACATCATGCAAAGGAAGAAGGAATAAAACTTAATTTGCTAACTAATCCTGTAGAGATTTTAGGGGATGAAAA TGGTTGGGTAAAAGGAATGAAGTGTATTAAAATGGAACTAGGAGAGCCAGATCAATCAGGAAGAAGAAGACCTATTGAAA TACCAGGTTCAGAATTTACTATAGAGTTAGATAGTGTTATTATGTCTTTAGGTACATCTCCAAATCCACTTATAGCATCC ACAACAGAGGGATTAGAAAGTACAAAGCGAGGCTGTATAGTAGCTGAGGAAGAAACAGGAGCTACTACAAAGGTAGGAGT ATTTGCAGGTGGAGATGCAGTAACAGGTGCTGCTACAGTTATATTGGCTATGGGAGCAGGTAAAAAAGCTGCTAAAGCTA TAGATGAATATTTAAGTGATAAATAA
Upstream 100 bases:
>100_bases GACAACAAATGTATAAAACTGAAGAAGGAAAGAAATTATTAGAAGATCAAGAAAAAGCAGAAGGACATGTATGCCATGTA GGATTGGATGGTGATAAATA
Downstream 100 bases:
>100_bases TATTATCTTATAATAAATATTGACAAATATGTATAATTAGTTATAACCTATAAGCTGTACTTTATATTTAAAGTACAGCT TATTTATTTTCAAATTTTAG
Product: putative oxidoreductase
Products: L-glutamine; 2-oxoglutarate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MDRMKRVSVKEQDPNKRITNFDEVCLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKAIAKD SALPAVCGRVCPQETQCEGKCVLGIKGEPVAIGKLERFVADWSRKNNVDLSSTEEKKNKKVAVIGSGPAGLTCAGDLAKK GYDVTIFEALHEPGGVLVYGIPEFRLPKDTVVKHEIDNVKKLGVKIETNVIVGRTVTIDDLVEEEDFQAIFIGSGAGLPK FMGIPGENLNGVFSANEFLTRTNLMKAFKEEYDTPIKVGEKVAVVGGGNVAMDAARTAKRLGAEVYIVYRRSESELPARV EEVHHAKEEGIKLNLLTNPVEILGDENGWVKGMKCIKMELGEPDQSGRRRPIEIPGSEFTIELDSVIMSLGTSPNPLIAS TTEGLESTKRGCIVAEEETGATTKVGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSDK
Sequences:
>Translated_461_residues MDRMKRVSVKEQDPNKRITNFDEVCLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKAIAKD SALPAVCGRVCPQETQCEGKCVLGIKGEPVAIGKLERFVADWSRKNNVDLSSTEEKKNKKVAVIGSGPAGLTCAGDLAKK GYDVTIFEALHEPGGVLVYGIPEFRLPKDTVVKHEIDNVKKLGVKIETNVIVGRTVTIDDLVEEEDFQAIFIGSGAGLPK FMGIPGENLNGVFSANEFLTRTNLMKAFKEEYDTPIKVGEKVAVVGGGNVAMDAARTAKRLGAEVYIVYRRSESELPARV EEVHHAKEEGIKLNLLTNPVEILGDENGWVKGMKCIKMELGEPDQSGRRRPIEIPGSEFTIELDSVIMSLGTSPNPLIAS TTEGLESTKRGCIVAEEETGATTKVGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSDK >Mature_461_residues MDRMKRVSVKEQDPNKRITNFDEVCLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPEFIEHIKEGEFEKAAKAIAKD SALPAVCGRVCPQETQCEGKCVLGIKGEPVAIGKLERFVADWSRKNNVDLSSTEEKKNKKVAVIGSGPAGLTCAGDLAKK GYDVTIFEALHEPGGVLVYGIPEFRLPKDTVVKHEIDNVKKLGVKIETNVIVGRTVTIDDLVEEEDFQAIFIGSGAGLPK FMGIPGENLNGVFSANEFLTRTNLMKAFKEEYDTPIKVGEKVAVVGGGNVAMDAARTAKRLGAEVYIVYRRSESELPARV EEVHHAKEEGIKLNLLTNPVEILGDENGWVKGMKCIKMELGEPDQSGRRRPIEIPGSEFTIELDSVIMSLGTSPNPLIAS TTEGLESTKRGCIVAEEETGATTKVGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSDK
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=470, Percent_Identity=32.3404255319149, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI237757300, Length=106, Percent_Identity=38.6792452830189, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1788811, Length=455, Percent_Identity=38.4615384615385, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI1789606, Length=464, Percent_Identity=36.8534482758621, Blast_Score=286, Evalue=3e-78, Organism=Escherichia coli, GI87082180, Length=448, Percent_Identity=37.7232142857143, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI1788468, Length=441, Percent_Identity=34.0136054421769, Blast_Score=215, Evalue=5e-57, Organism=Escherichia coli, GI1789243, Length=417, Percent_Identity=33.0935251798561, Blast_Score=170, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17570289, Length=477, Percent_Identity=28.7211740041929, Blast_Score=174, Evalue=9e-44, Organism=Caenorhabditis elegans, GI71984108, Length=450, Percent_Identity=31.5555555555556, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17543860, Length=178, Percent_Identity=31.4606741573034, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320030, Length=480, Percent_Identity=30.625, Blast_Score=204, Evalue=2e-53, Organism=Drosophila melanogaster, GI28574881, Length=483, Percent_Identity=30.4347826086957, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24665539, Length=483, Percent_Identity=30.4347826086957, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24665547, Length=483, Percent_Identity=30.4347826086957, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24665543, Length=483, Percent_Identity=30.4347826086957, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24640763, Length=449, Percent_Identity=32.0712694877506, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI18858217, Length=449, Percent_Identity=32.0712694877506, Blast_Score=175, Evalue=5e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: 1.4.1.13
Molecular weight: Translated: 49797; Mature: 49797
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRMKRVSVKEQDPNKRITNFDEVCLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPE CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHH FIEHIKEGEFEKAAKAIAKDSALPAVCGRVCPQETQCEGKCVLGIKGEPVAIGKLERFVA HHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHH DWSRKNNVDLSSTEEKKNKKVAVIGSGPAGLTCAGDLAKKGYDVTIFEALHEPGGVLVYG HHCCCCCCCCCCCHHCCCCEEEEEECCCCCCEECCHHHHCCCCEEEEHHHCCCCCEEEEC IPEFRLPKDTVVKHEIDNVKKLGVKIETNVIVGRTVTIDDLVEEEDFQAIFIGSGAGLPK CCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEHHHHHCCCCCCEEEEECCCCCCH FMGIPGENLNGVFSANEFLTRTNLMKAFKEEYDTPIKVGEKVAVVGGGNVAMDAARTAKR HCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHHH LGAEVYIVYRRSESELPARVEEVHHAKEEGIKLNLLTNPVEILGDENGWVKGMKCIKMEL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHEECCCCCCCCCEEEEEEEC GEPDQSGRRRPIEIPGSEFTIELDSVIMSLGTSPNPLIASTTEGLESTKRGCIVAEEETG CCCCCCCCCCCEECCCCEEEEEHHHHHHHHCCCCCCEEEECHHHHHHHCCCEEEEECCCC ATTKVGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSDK CEEEEEEEECCCCHHHHEEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MDRMKRVSVKEQDPNKRITNFDEVCLGYTEEDAIEEAKRCLHCKKPMCVGKCPVSVNIPE CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHH FIEHIKEGEFEKAAKAIAKDSALPAVCGRVCPQETQCEGKCVLGIKGEPVAIGKLERFVA HHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHH DWSRKNNVDLSSTEEKKNKKVAVIGSGPAGLTCAGDLAKKGYDVTIFEALHEPGGVLVYG HHCCCCCCCCCCCHHCCCCEEEEEECCCCCCEECCHHHHCCCCEEEEHHHCCCCCEEEEC IPEFRLPKDTVVKHEIDNVKKLGVKIETNVIVGRTVTIDDLVEEEDFQAIFIGSGAGLPK CCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEEEHHHHHCCCCCCEEEEECCCCCCH FMGIPGENLNGVFSANEFLTRTNLMKAFKEEYDTPIKVGEKVAVVGGGNVAMDAARTAKR HCCCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHHH LGAEVYIVYRRSESELPARVEEVHHAKEEGIKLNLLTNPVEILGDENGWVKGMKCIKMEL CCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCHHEECCCCCCCCCEEEEEEEC GEPDQSGRRRPIEIPGSEFTIELDSVIMSLGTSPNPLIASTTEGLESTKRGCIVAEEETG CCCCCCCCCCCEECCCCEEEEEHHHHHHHHCCCCCCEEEECHHHHHHHCCCEEEEECCCC ATTKVGVFAGGDAVTGAATVILAMGAGKKAAKAIDEYLSDK CEEEEEEEECCCCHHHHEEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamate; NADP+
Specific reaction: 2 L-glutamate + NADP+ = L-glutamine + 2-oxoglutarate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]