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The map label for this gene is ydjZ [H]

Identifier: 148381244

GI number: 148381244

Start: 3510946

End: 3511680

Strand: Reverse

Name: ydjZ [H]

Synonym: CBO3301

Alternate gene names: 148381244

Gene position: 3511680-3510946 (Counterclockwise)

Preceding gene: 148381245

Following gene: 148381242

Centisome position: 90.35

GC content: 22.18

Gene sequence:

>735_bases
ATGCTGGAAAGTATAAAAAAATATATAAAAAAAAATATAAATATTATTAAAGAAACATTAATTGATAACAAAGGAAGTAT
AATATTATCTTTATTTGTTTTATTTATAATTTTTATAGGTTATATATATTATAAAAATTTTGCAGTATTAAAAGATCCTA
AAAATATTAAAAATATTATACTGTCCTATGGCAGTTATGGTATTATTGTGTTCTTGATATTTCAAATAATTCAAGTTGTA
GCTTTTTTTATACCAGGAGAAGTAATGCAAATAGCTGGAGGATATATATACGGAACTTTGCTAGGAAGTGTATATTCTCT
TATAGGGATTACTTTAGGAAGTGTTTTTGTATTTTTATTAGCTCATATATATGGTAGACCTTTAGTTCATAAAATAATTT
CTAAAAAAGATTTAAAATTTTTTGATAGAATGTTGAATATAGGAGGTATAAAATTAATAGTATTTTTATTATATTTAATA
CCAGGAATACCTAAAGATGCATTAGGTTATATATGTGGTATATCAGATATTAAATTTAAAGATTTTTTTATTTTATCCAC
ATTAGGTAGAATACCAGGAGTTTTAGCATCTGCATATTTTGGAGCAAATATTCATACTGGAAATAAGTCTATTTTGATAA
TAGTAGGTGTTGTATCATCTTTAGTTTTTATAATAGGAGTATTAAATGGGGAAAAAATAATAAAAAAAATAGGGAAAAAT
ATGAGGAAATTATAA

Upstream 100 bases:

>100_bases
AGTTAGTAAAATTTATTAAGCATTAATTTGTAAATAAAAAATATGATATTATTTATATAAATAATAAAAAATAATATTTT
ATAAATAAAGGGGAAAAATT

Downstream 100 bases:

>100_bases
TCTTCTCATATTTTTATACAATATGTAAGAAATTAAAGAAAAAAATATTATAAAAAATAGTATAAGTAAAACAGAATGAA
AAAAGAAAGTTTCAGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MLESIKKYIKKNINIIKETLIDNKGSIILSLFVLFIIFIGYIYYKNFAVLKDPKNIKNIILSYGSYGIIVFLIFQIIQVV
AFFIPGEVMQIAGGYIYGTLLGSVYSLIGITLGSVFVFLLAHIYGRPLVHKIISKKDLKFFDRMLNIGGIKLIVFLLYLI
PGIPKDALGYICGISDIKFKDFFILSTLGRIPGVLASAYFGANIHTGNKSILIIVGVVSSLVFIIGVLNGEKIIKKIGKN
MRKL

Sequences:

>Translated_244_residues
MLESIKKYIKKNINIIKETLIDNKGSIILSLFVLFIIFIGYIYYKNFAVLKDPKNIKNIILSYGSYGIIVFLIFQIIQVV
AFFIPGEVMQIAGGYIYGTLLGSVYSLIGITLGSVFVFLLAHIYGRPLVHKIISKKDLKFFDRMLNIGGIKLIVFLLYLI
PGIPKDALGYICGISDIKFKDFFILSTLGRIPGVLASAYFGANIHTGNKSILIIVGVVSSLVFIIGVLNGEKIIKKIGKN
MRKL
>Mature_244_residues
MLESIKKYIKKNINIIKETLIDNKGSIILSLFVLFIIFIGYIYYKNFAVLKDPKNIKNIILSYGSYGIIVFLIFQIIQVV
AFFIPGEVMQIAGGYIYGTLLGSVYSLIGITLGSVFVFLLAHIYGRPLVHKIISKKDLKFFDRMLNIGGIKLIVFLLYLI
PGIPKDALGYICGISDIKFKDFFILSTLGRIPGVLASAYFGANIHTGNKSILIIVGVVSSLVFIIGVLNGEKIIKKIGKN
MRKL

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=157, Percent_Identity=27.3885350318471, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87081964, Length=149, Percent_Identity=31.5436241610738, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 27166; Mature: 27166

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]