| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148381183
Identifier: 148381183
GI number: 148381183
Start: 3444600
End: 3445412
Strand: Reverse
Name: 148381183
Synonym: CBO3234
Alternate gene names: NA
Gene position: 3445412-3444600 (Counterclockwise)
Preceding gene: 148381184
Following gene: 148381182
Centisome position: 88.64
GC content: 23.37
Gene sequence:
>813_bases GTGGCAAAACCAAGTATTTTTAGCAAAGATTATGAAAGAAGAATGAAAAGAAGAAAAAGAAGAACTTTTTTTTCAGTTAT AGTTATAATATTAATTTCTTTAGTAATAATATTTACCAACAATGGTATTGGTAAAAAAATAAAAAATAGTTTAAATCAAA TAAAAGAAGAAACTAAGGCTGAAGAAGAACAAAAAAATAAACAACAAGAACAAAAGGAAAATAAAAAAGAAAATGAAAAT AAAAATGCAGCCACAGTAAAAAAAGAAAGTGAAGTTCCTAAAGATAATAATATAGAAGTTCAATTAGAAGACAATATGAA AATAAAGTTGATATATATAGAAGATAGTAATAAAAATAAGACTATTAAATCTATAGATTTAAATAAAAATAATTTATTAT ATGATATAAATCCTTCAAAAAATTCAATAGTTGTAACTAATCCTAAAACTCAAAATATTTATTTAGTAAATTTAAATGGT GAAAAGCAAGATATAACAAATAAGCAGTATACATCAACATCTGGAACAACTTTTCAAAAGGATGCTATATTAGCATCAAA GCAAGATTATTTATGGGGAGTTTTACCTAAATTTATAGATAATGATAATATAGCTTATGTTTCTCAACTACCATGGTTCA ATAAGACCACTAAATATGTATGGATGTATAATATAAAAAATAAAACTCATTTATACAATCAAAACATATCAGGAGAAGAC ATTAAGTTTGATAAATTAACAGAAAAAGGACTTACAGTAGTTTCAGATGGGAGAACTTTATTTTTGAAAGCAGATGGAAG TATATCCCAGTAA
Upstream 100 bases:
>100_bases AATTTTTATTGTTTTGAGTTATAATAGTGTTGAATATATAATAATTGATACATTTTATTTATTTTAGTATAGATAGGCAT TATATATAGGAGGAATTATT
Downstream 100 bases:
>100_bases ATTAAAAAATATTGAATAAATAAAATGAAACTAAAATTAATGGAGATATAAGAGTTTTAAGAGTGTATTAAGTGTGTACA CTCTTGCTTTATTTGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENEN KNAATVKKESEVPKDNNIEVQLEDNMKIKLIYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNG EKQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED IKFDKLTEKGLTVVSDGRTLFLKADGSISQ
Sequences:
>Translated_270_residues MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENEN KNAATVKKESEVPKDNNIEVQLEDNMKIKLIYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNG EKQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED IKFDKLTEKGLTVVSDGRTLFLKADGSISQ >Mature_269_residues AKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKAEEEQKNKQQEQKENKKENENK NAATVKKESEVPKDNNIEVQLEDNMKIKLIYIEDSNKNKTIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGE KQDITNKQYTSTSGTTFQKDAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGEDI KFDKLTEKGLTVVSDGRTLFLKADGSISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31314; Mature: 31183
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEEQKNKQQEQKENKKENENKNAATVKKESEVPKDNNIEVQLEDNMKIKLIYIEDSNKNK HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCC TIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGEKQDITNKQYTSTSGTTFQK EEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCHHHCCCCEECCCCCCEEEC DAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED CHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEECCCCCCCC IKFDKLTEKGLTVVSDGRTLFLKADGSISQ EEHHHHHCCCCEEEECCCEEEEECCCCCCC >Mature Secondary Structure AKPSIFSKDYERRMKRRKRRTFFSVIVIILISLVIIFTNNGIGKKIKNSLNQIKEETKA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH EEEQKNKQQEQKENKKENENKNAATVKKESEVPKDNNIEVQLEDNMKIKLIYIEDSNKNK HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCCCCEEEEECCCCEEEEEEEECCCCCC TIKSIDLNKNNLLYDINPSKNSIVVTNPKTQNIYLVNLNGEKQDITNKQYTSTSGTTFQK EEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCHHHCCCCEECCCCCCEEEC DAILASKQDYLWGVLPKFIDNDNIAYVSQLPWFNKTTKYVWMYNIKNKTHLYNQNISGED CHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEEECCCCCCCC IKFDKLTEKGLTVVSDGRTLFLKADGSISQ EEHHHHHCCCCEEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA