| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is ktrB [H]
Identifier: 148381083
GI number: 148381083
Start: 3335151
End: 3336494
Strand: Reverse
Name: ktrB [H]
Synonym: CBO3134
Alternate gene names: 148381083
Gene position: 3336494-3335151 (Counterclockwise)
Preceding gene: 148381084
Following gene: 148381082
Centisome position: 85.84
GC content: 30.51
Gene sequence:
>1344_bases ATGAAAATACCACATATAGGAAGGAGATTTACCCCGGTTCAAATATTAGCTATTGGTTTTGCAATAGTAATATTTGTAGG TGCTGTATTACTTAGTTTACCTATTTCATCGCAAAGTGGGCAAAGGACTCCTTTTTTAGATTGTCTATTTACATCTACAT CTTCAGTTTGTGTTACAGGACTAATAGTAGTAGACACAGGAACTCATTGGACTTATTTTGGTAAAACAGTTATTATGCTT CTTATAGAAATTGGAGGACTAGGATTTATGTCTTTTGCAACTTTACTTGCGATATTGCTAGGTAAGAAAATAACATTAAA AGAAAGACTTGTTATGCAAGAAGCATTAAATACTTTTAATATACAAGGTTTAGTTAAAATGGCAAAATACATACTGCTAT TTACTTTCTCTATACAAGGAGGAGGAGCACTTTTATTATCAACGCAATTTATTCCTAGATATGGATTGGCTAAAGGATTA TATTATAGCATTTTTCATTCTGTATCAGCCTTTTGTAATGCAGGATTTGATCTTTTTGGTAATTTTAGTAGTTTAACTAG TGTTTATAATAATCCCGTTATAATTTTAGTTATAGCTTTTTTAATAATAATAGGAGGAATAGGTTTCTATGTATGGTATG AAATATATCATTATAAAGGTCGTAGAAAGTTATCTACCCATTCCAAGTTAGTACTTTGGGCTACATTTCTATTATTAACT GTAGGAACTATATTGATGTTTATATTTGAAAGTAATAATCCAGGAACTATGGCTAATATGACTTTTAATAACAAGATATT GTCATCATTTTTTGCTGCCGTTACCCCAAGAACTGCAGGATTTAATTCAATATCTACATCTGATATGACTATGGCAGGAA AATTTTTAACAATACTTTTAATGTTTGTAGGAGGCGCTTCAGGATCTACAGCAGGAGGTATAAAAGTTACAACTGCAGGT GTACTTATAATGACTGTAGTTTGTGTAGTTAAAGGAAAGCAAGATACAGAAATAAATAAAAAAAGAATAAGCAAGGAAAT TGTATATAGAGCTTTAGCTATAACTGTTATAGGTTTAGCTTTAGTTATTACAGTTACTATGATATTATCAATAACAGAGG TCAAGGTTCCTTTTGAATACTATTTGTATGAAGCCACATCAGCCTTTGGCACAGTAGGTATAACTTTAGGCTTAACTACT AAATTAAGCTCTATTGGAAAAATAGTTATACTATTGACTATGTATGCAGGCAGAGTTGGACCATTAACATTAGCTATAGC TTTTGCAAGAAAGCTAAAAAATAGTTCTATTAAATATCCAGAAGAAAAAATATTAGTAGGTTAG
Upstream 100 bases:
>100_bases CGGCTTAAATAGCCGTATTTTTTAATATTTTATAAAATTGACAAAATAATCATAAGTGCTATAATAAGCTTATCTTTTAG GCAGGAGGGAGTAAAAATAA
Downstream 100 bases:
>100_bases AGGTGTTATTATGGGGAAAAAGCAATTTGTTGTCATAGGCCTTGGAAGATTTGGTACTTCCGTTGCAAAAACTTTATATA CTTTAGGAAATGATGTATTG
Product: potassium uptake protein, TrkH family
Products: Proton [Cytoplasm]; K (I) [Cytoplasm] [C]
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKIPHIGRRFTPVQILAIGFAIVIFVGAVLLSLPISSQSGQRTPFLDCLFTSTSSVCVTGLIVVDTGTHWTYFGKTVIML LIEIGGLGFMSFATLLAILLGKKITLKERLVMQEALNTFNIQGLVKMAKYILLFTFSIQGGGALLLSTQFIPRYGLAKGL YYSIFHSVSAFCNAGFDLFGNFSSLTSVYNNPVIILVIAFLIIIGGIGFYVWYEIYHYKGRRKLSTHSKLVLWATFLLLT VGTILMFIFESNNPGTMANMTFNNKILSSFFAAVTPRTAGFNSISTSDMTMAGKFLTILLMFVGGASGSTAGGIKVTTAG VLIMTVVCVVKGKQDTEINKKRISKEIVYRALAITVIGLALVITVTMILSITEVKVPFEYYLYEATSAFGTVGITLGLTT KLSSIGKIVILLTMYAGRVGPLTLAIAFARKLKNSSIKYPEEKILVG
Sequences:
>Translated_447_residues MKIPHIGRRFTPVQILAIGFAIVIFVGAVLLSLPISSQSGQRTPFLDCLFTSTSSVCVTGLIVVDTGTHWTYFGKTVIML LIEIGGLGFMSFATLLAILLGKKITLKERLVMQEALNTFNIQGLVKMAKYILLFTFSIQGGGALLLSTQFIPRYGLAKGL YYSIFHSVSAFCNAGFDLFGNFSSLTSVYNNPVIILVIAFLIIIGGIGFYVWYEIYHYKGRRKLSTHSKLVLWATFLLLT VGTILMFIFESNNPGTMANMTFNNKILSSFFAAVTPRTAGFNSISTSDMTMAGKFLTILLMFVGGASGSTAGGIKVTTAG VLIMTVVCVVKGKQDTEINKKRISKEIVYRALAITVIGLALVITVTMILSITEVKVPFEYYLYEATSAFGTVGITLGLTT KLSSIGKIVILLTMYAGRVGPLTLAIAFARKLKNSSIKYPEEKILVG >Mature_447_residues MKIPHIGRRFTPVQILAIGFAIVIFVGAVLLSLPISSQSGQRTPFLDCLFTSTSSVCVTGLIVVDTGTHWTYFGKTVIML LIEIGGLGFMSFATLLAILLGKKITLKERLVMQEALNTFNIQGLVKMAKYILLFTFSIQGGGALLLSTQFIPRYGLAKGL YYSIFHSVSAFCNAGFDLFGNFSSLTSVYNNPVIILVIAFLIIIGGIGFYVWYEIYHYKGRRKLSTHSKLVLWATFLLLT VGTILMFIFESNNPGTMANMTFNNKILSSFFAAVTPRTAGFNSISTSDMTMAGKFLTILLMFVGGASGSTAGGIKVTTAG VLIMTVVCVVKGKQDTEINKKRISKEIVYRALAITVIGLALVITVTMILSITEVKVPFEYYLYEATSAFGTVGITLGLTT KLSSIGKIVILLTMYAGRVGPLTLAIAFARKLKNSSIKYPEEKILVG
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 48581; Mature: 48581
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPHIGRRFTPVQILAIGFAIVIFVGAVLLSLPISSQSGQRTPFLDCLFTSTSSVCVTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEE LIVVDTGTHWTYFGKTVIMLLIEIGGLGFMSFATLLAILLGKKITLKERLVMQEALNTFN EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IQGLVKMAKYILLFTFSIQGGGALLLSTQFIPRYGLAKGLYYSIFHSVSAFCNAGFDLFG HHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC NFSSLTSVYNNPVIILVIAFLIIIGGIGFYVWYEIYHYKGRRKLSTHSKLVLWATFLLLT CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VGTILMFIFESNNPGTMANMTFNNKILSSFFAAVTPRTAGFNSISTSDMTMAGKFLTILL HHHHHEEEEECCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH MFVGGASGSTAGGIKVTTAGVLIMTVVCVVKGKQDTEINKKRISKEIVYRALAITVIGLA HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVITVTMILSITEVKVPFEYYLYEATSAFGTVGITLGLTTKLSSIGKIVILLTMYAGRVG HHHHHHHHHHHHHEECCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC PLTLAIAFARKLKNSSIKYPEEKILVG HHHHHHHHHHHHCCCCCCCCHHHCCCC >Mature Secondary Structure MKIPHIGRRFTPVQILAIGFAIVIFVGAVLLSLPISSQSGQRTPFLDCLFTSTSSVCVTG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEE LIVVDTGTHWTYFGKTVIMLLIEIGGLGFMSFATLLAILLGKKITLKERLVMQEALNTFN EEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IQGLVKMAKYILLFTFSIQGGGALLLSTQFIPRYGLAKGLYYSIFHSVSAFCNAGFDLFG HHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHC NFSSLTSVYNNPVIILVIAFLIIIGGIGFYVWYEIYHYKGRRKLSTHSKLVLWATFLLLT CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VGTILMFIFESNNPGTMANMTFNNKILSSFFAAVTPRTAGFNSISTSDMTMAGKFLTILL HHHHHEEEEECCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH MFVGGASGSTAGGIKVTTAGVLIMTVVCVVKGKQDTEINKKRISKEIVYRALAITVIGLA HHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVITVTMILSITEVKVPFEYYLYEATSAFGTVGITLGLTTKLSSIGKIVILLTMYAGRVG HHHHHHHHHHHHHEECCHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCC PLTLAIAFARKLKNSSIKYPEEKILVG HHHHHHHHHHHHCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Periplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Periplasm] = Proton [Cytoplasm] + K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]