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The map label for this gene is selD

Identifier: 148380928

GI number: 148380928

Start: 3172107

End: 3173093

Strand: Direct

Name: selD

Synonym: CBO2977

Alternate gene names: NA

Gene position: 3172107-3173093 (Clockwise)

Preceding gene: 148380919

Following gene: 148380930

Centisome position: 81.61

GC content: 31.71

Gene sequence:

>1080_bases
ATGTCAAATAATATAAATATTAAAGAAGGAGAAGCCTGTTCTATAGAGAAAAAAGAAGTAAGACTTACAGAGCTTTCAAG
AACATCAGGATGAGCGGCTAAGATAGCACCGGGAGTGCTCTCAAAAATACTTTCAAAATTACCTAAAATGGAAAGTGAAA
ATTTAATAGTAGGAATAGAAACTGCAGATGATGCAGCAGTATATAAAATAAATGATGATACAGCTATGATACAGACATTA
GATTTTTTTACACCTATAGTAGATGATCCATATATGTTCGGCCAAATAGCTGCAGCTAACTCTTTAAGCGATGTATATGC
TATGGGAGGTAAGCCAGTAGTAGCATTGAATATAGTTTGTTTTCCTTCATGTTTGCCTATAGAAGTTTTAGGCGAGATAT
TAAAAGGTGGAGCAGATAAGGTTATGGAATCAGGGGCTGTAGTAATAGGAGGACATACTGTTGATGATAACGAGCCTAAA
TATGGTTTGTCAGTAACAGGTATTGTACATCCAGATAAAGTTTTAAAAAATTATGGATGTAAAGAGGGCGAAGTTTTAAT
TACTACAAAACCTTTAGGGATAGGTATTATAAACACTGCTATAAAAGGAGATATGGCATCTAAAGAAGCAAAAGATGCAG
CAGTAAAATCTATGAGTACTTTAAATAAATATGCAGGGGAAATAATAACTAAATATAATATAAGTGCTTGTACGGATATT
ACTGGATTTGGTTTTCTAGGACATGCGTATGAGATGGCTAGTGCATCAAATGTTACTTTAAAATTTAACTATAAGAGAAT
ATCTTATATAAAAGAAGCAGAGGAATATGCTGAATTTGGATTAGTTCCAGCAGGAGCTTACGCTAATAGAGATCATATCG
AAGGAAATTTTGAGTTTAAAAATGTTCCTGTATTTATGCAAGATATATTATTTGATCCTCAAACTTCAGGTGGATTATTA
ATTTCTTGTTCAAAAGAAGAGTCAGAAAAAATTATGAAAGAATTAAATAAATTGGAGTTAAAATCTTCTATTGTAGGAGA
AGTTATAAGGAAACAAGATAAATATATAATAGTTGAATAA

Upstream 100 bases:

>100_bases
TTTATATTTCTTTTAAATTTTTACAAAATAATATATAATGAGTATTGAATAATTTATTATTTTTAATGTAGTTTGGTTTT
TATAAAGAGAGGTGCTTAAA

Downstream 100 bases:

>100_bases
AATATTATACTATTTATGACAATAAGTATTGAATATACAACATAATTAAGGAATGGAGAAAAGGGCATGGATAAAAAACA
ATTATTACGTAATTTACCTA

Product: selenide, water dikinase, selenocysteine-containing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>358_residues
MSNNINIKEGEACSIEKKEVRLTELSRTSGAAKIAPGVLSKILSKLPKMESENLIVGIETADDAAVYKINDDTAMIQTLD
FFTPIVDDPYMFGQIAAANSLSDVYAMGGKPVVALNIVCFPSCLPIEVLGEILKGGADKVMESGAVVIGGHTVDDNEPKY
GLSVTGIVHPDKVLKNYGCKEGEVLITTKPLGIGIINTAIKGDMASKEAKDAAVKSMSTLNKYAGEIITKYNISACTDIT
GFGFLGHAYEMASASNVTLKFNYKRISYIKEAEEYAEFGLVPAGAYANRDHIEGNFEFKNVPVFMQDILFDPQTSGGLLI
SCSKEESEKIMKELNKLELKSSIVGEVIRKQDKYIIVE

Sequences:

>Translated_329_residues
LFNYYIFILFPYNFSYNRRF*LQFI*FFHNFF*LFF*TRN**ST*SLRIK*YILHKYRNIFKLKISFDMISISVSSCWN*
SKFSIFLCFFYIRYSLIVKF*SNI*CTSHLIRMS*KTKSSNIRTSTYIIFSYYFPCIFI*STHRFYCCIFCFFRCHISFY
SSVYNTYP*RFCSN*NFALFTSIIF*NFIWMYNTCY*QTIFRLVIINSMSSYYYSP*FHNLICSTF*YLA*NFYRQT*RK
TNYIQCYYWLTSHSIYIA*RVSCSYLAEHIWIIYYRCKKI*CLYHSCIIIYFIYCCIICSFYSYY*IFTFHFR*F*KYF*
EHSRCYLSR
>Mature_329_residues
LFNYYIFILFPYNFSYNRRF*LQFI*FFHNFF*LFF*TRN**ST*SLRIK*YILHKYRNIFKLKISFDMISISVSSCWN*
SKFSIFLCFFYIRYSLIVKF*SNI*CTSHLIRMS*KTKSSNIRTSTYIIFSYYFPCIFI*STHRFYCCIFCFFRCHISFY
SSVYNTYP*RFCSN*NFALFTSIIF*NFIWMYNTCY*QTIFRLVIINSMSSYYYSP*FHNLICSTF*YLA*NFYRQT*RK
TNYIQCYYWLTSHSIYIA*RVSCSYLAEHIWIIYYRCKKI*CLYHSCIIIYFIYCCIICSFYSYY*IFTFHFR*F*KYF*
EHSRCYLSR

Specific function: Unknown

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37069; Mature: 37069

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
LFNYYIFILFPYNFSYNRRFLQFIFFHNFFLFFTRNSTSLRIKYILHKYRNIFKLKISFD
CCEEEEEEEEECCCCCCHHHHHHHHHHHEEEEEECCCCCEEHHHHHHHHCCEEEEEEEEE
MISISVSSCWNSKFSIFLCFFYIRYSLIVKFSNICTSHLIRMSKTKSSNIRTSTYIIFSY
EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEEEEEH
YFPCIFISTHRFYCCIFCFFRCHISFYSSVYNTYPRFCSNNFALFTSIIFNFIWMYNTCY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHH
QTIFRLVIINSMSSYYYSPFHNLICSTFYLANFYRQTRKTNYIQCYYWLTSHSIYIARVS
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEEEE
CSYLAEHIWIIYYRCKKICLYHSCIIIYFIYCCIICSFYSYYIFTFHFRFKYFEHSRCYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA