| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380884
Identifier: 148380884
GI number: 148380884
Start: 3121472
End: 3122032
Strand: Reverse
Name: 148380884
Synonym: CBO2932
Alternate gene names: NA
Gene position: 3122032-3121472 (Counterclockwise)
Preceding gene: 148380885
Following gene: 148380882
Centisome position: 80.32
GC content: 31.73
Gene sequence:
>561_bases TTGACTTTTTTGAATATATGTAATAATATGTATATAGACAGGCCTGTACTAAAATTTAGAAAGGACGAATATCATGAAAA AAACTTATCTATTTTTTTCTTAGCTATTGGGATATTCTTTTTAAATATAACTCCAGTTTCTGCTTCTACATGTGATGGAT ATATTAACTGGGAACAGGAGCCAAATAATCTAATGAGCAAAGAAGAAACCAATTATTTACTACCTTATAGTTATTGTCAT ACAGCAAACAAAGGATACCTTCCTGCAGGGGATATTGATGTATGGAATTTCGATGCAATTAAGAAAAATTATAAAGTATC ATTTAGGGCACCTGAAGGATATTATTATGATCTAGTAATTTGGCAAAGGTTTAGTGATGGACACCTAGAAGAAGTAGCTA GAACAGATAGCCTTGATCAAGTAAAAGAGATTGATCTTCCAGGTCGTACAGGTAGTGATGGTGAATTAATTAAAGAGTAT CTAGTTGTAGTTCATAGTAAATGGACCACAAATAGAGATGCAGATGAGCCATATACATTAGTACTTCTTGATAAAGAGTA A
Upstream 100 bases:
>100_bases TTTGATGAATATATATGGGCTAACTTTTTAGGCAGTTAAATAGGTATAAAATTTTTATAATTAGTTTGTTTTTACATAAT TTGATTATTTTATATTAAAT
Downstream 100 bases:
>100_bases TCAAAATAGGGAATCCTGTATTCAGGGTTCTTTATTTTATTTAGGATAAATAAATTATATAATCAACTCTATTTTATTTA GCAAAGATAGGTGTAACATG
Product: exported protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTFLNICNNMYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQEPNNLMSKEETNYLLPYSYCH TANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVIWQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEY LVVVHSKWTTNRDADEPYTLVLLDKE
Sequences:
>Translated_186_residues MTFLNICNNMYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQEPNNLMSKEETNYLLPYSYCH TANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVIWQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEY LVVVHSKWTTNRDADEPYTLVLLDKE >Mature_185_residues TFLNICNNMYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQEPNNLMSKEETNYLLPYSYCHT ANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVIWQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEYL VVVHSKWTTNRDADEPYTLVLLDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21720; Mature: 21588
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLNICNNMYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQE CCHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEECCCC PNNLMSKEETNYLLPYSYCHTANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVI CCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCCEEEHHHHCCCCEEEEECCCCEEEEEEE WQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEYLVVVHSKWTTNRDADEPYTL EEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEE VLLDKE EEEECC >Mature Secondary Structure TFLNICNNMYIDRPVLKFRKDEYHEKNLSIFFLAIGIFFLNITPVSASTCDGYINWEQE CHHHHHCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEECCCC PNNLMSKEETNYLLPYSYCHTANKGYLPAGDIDVWNFDAIKKNYKVSFRAPEGYYYDLVI CCCCCCCCCCCEECCCHHHHCCCCCCCCCCCCCEEEHHHHCCCCEEEEECCCCEEEEEEE WQRFSDGHLEEVARTDSLDQVKEIDLPGRTGSDGELIKEYLVVVHSKWTTNRDADEPYTL EEECCCCHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEE VLLDKE EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA