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The map label for this gene is yqjN [H]

Identifier: 148380862

GI number: 148380862

Start: 3097761

End: 3099392

Strand: Reverse

Name: yqjN [H]

Synonym: CBO2907

Alternate gene names: 148380862

Gene position: 3099392-3097761 (Counterclockwise)

Preceding gene: 148380863

Following gene: 148380860

Centisome position: 79.74

GC content: 26.47

Gene sequence:

>1632_bases
ATGATGATGAGAGATAAAATATTTAAAACTTTAGATAGATTAGTAAAAATACCTAGTATATCAGGAACAGAAAAAGAAAA
TTTAGCAGTAGATGAAATTTATAATATATTAATGGATATAGATTATTTTAAAAATAATAAGAGCAATGTAAAAGTACATA
ATATAGAAGGGGATATGCATAACAGATGCTTTTTAACAGCATTGTTAGAAGGTAAGAAGCCATCAAAGGATATAATAATA
TTAACAGGACATTTAGATGTAGTAGATATAGATGAATTTGGCATTTTAAAAAATATAGCTTTTGACTATAAAGAATATAC
CAAAAGAGTATCAGATTTAGTATTGGATCAGGACTCGAAAAAGGATTTATATTCTAATGAGTGGATATTTGGTAGAGGCA
CAGCAGATATGAAATATGGACTAGCTCTTTATATAGAATTAATAAGAGAGTTATCAAAAGATAGAGATTTTAAAGGAAAT
ATACTGTTTTTAGCAGTACCGGGAGAAGAAAGTAACTCAGAAGGAATGTTAGGGGCAATACCTTATTTATCTAAATTAAA
AGAAGACGGCTATAATTTTAAATCTTTATTTTTATCAGAATGTTGTATACCTAAATATGAAGGGGACGATGCCAAAAGAA
TCTACATAGGTTCTGTAGGAAAAATAATGCCAACTTTCTTTTGTGTAGGAAAAGCAACTCATGTAGGCAATCCTTTTGGA
GGGGTAAATCCTAATTTATTAGTATCTGAAATAAATAGACTTATGGAATATAATGTAGAGCTAAGTGATAAATATGAAAA
AGATATAACACCACCACCAGTTTGTTTAAAACAATCAGATCTAAAAGAATTATATTCTGTACAAAACCCTGTATATGCAT
ATTCTTATTATAATTTATTAACTATACAAAAAACTCCAGAAGAAATCATGGAGAATTTAAAGGATATAGCAAGGAAAGCT
TTTTATAATACTCTTAAAATAATTAAAGAAAATTATAAAAAATATAAAGCAATATATGAAAGTAAATTAGAAGCAGACTT
AGATATAGAACCTAAAATCATAACTTTTGAAGAACTATATAAGGAAGTATTAAAGGAAAACAAAGATTTCGAAAAATATA
TAGAGACGGCTATAGAAAAATGGAAAGAAGAAAAATTAGATAATCAAACTATAGGAATAAAAATAATAAAAGAGACCTTT
GAACACTATAAATATCAACAGCCTATGATAATAATTGCATACAATGTACCTTATTATCCACATAGATATTTTGATAGTGA
AAATCCTAAATATACTAATTTGTTAAATTCATTAGATAACATGGGAATTTATGCAAAAGAAAAATATAATGTGAATATAG
AAAAAGAAAATTTCTTTATGGGTATAAGTGATTTAAGTTATACAGGTTTAGATGAAAAATTCAATATAGAAAGTATCTGC
GGAAATATGCCTGGTTTAGGTTATACATATAAATTTCCAGAAAAAGAACTAAAGAAATTTGATATACCATCTGTAGTATT
CGGAGGCTTTGGAAAGGATTTTCATAAATATACAGAGAGATTAGATATCCCATATTCTATGGATATAGTCCCAGAATTGT
ATATGTATATATTAAAGGAAATGCTACAGTAA

Upstream 100 bases:

>100_bases
TAGATAGTATAGAATTTGGAAGATTTACAGGACTTGAAGAAAAATATTTTAAAAAATTTGTACAAATCCTTGTAGAGAAT
ATAGATTGGAGTGGTAAATA

Downstream 100 bases:

>100_bases
ATAAGGAAATTACGACTTAATAGCTCTTAAAGCTTGAGAATTAAAATAAGAAATACTTTTGTTCGATAGATAGCTATAAA
AATAAAGAATACTAATATTT

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MMMRDKIFKTLDRLVKIPSISGTEKENLAVDEIYNILMDIDYFKNNKSNVKVHNIEGDMHNRCFLTALLEGKKPSKDIII
LTGHLDVVDIDEFGILKNIAFDYKEYTKRVSDLVLDQDSKKDLYSNEWIFGRGTADMKYGLALYIELIRELSKDRDFKGN
ILFLAVPGEESNSEGMLGAIPYLSKLKEDGYNFKSLFLSECCIPKYEGDDAKRIYIGSVGKIMPTFFCVGKATHVGNPFG
GVNPNLLVSEINRLMEYNVELSDKYEKDITPPPVCLKQSDLKELYSVQNPVYAYSYYNLLTIQKTPEEIMENLKDIARKA
FYNTLKIIKENYKKYKAIYESKLEADLDIEPKIITFEELYKEVLKENKDFEKYIETAIEKWKEEKLDNQTIGIKIIKETF
EHYKYQQPMIIIAYNVPYYPHRYFDSENPKYTNLLNSLDNMGIYAKEKYNVNIEKENFFMGISDLSYTGLDEKFNIESIC
GNMPGLGYTYKFPEKELKKFDIPSVVFGGFGKDFHKYTERLDIPYSMDIVPELYMYILKEMLQ

Sequences:

>Translated_543_residues
MMMRDKIFKTLDRLVKIPSISGTEKENLAVDEIYNILMDIDYFKNNKSNVKVHNIEGDMHNRCFLTALLEGKKPSKDIII
LTGHLDVVDIDEFGILKNIAFDYKEYTKRVSDLVLDQDSKKDLYSNEWIFGRGTADMKYGLALYIELIRELSKDRDFKGN
ILFLAVPGEESNSEGMLGAIPYLSKLKEDGYNFKSLFLSECCIPKYEGDDAKRIYIGSVGKIMPTFFCVGKATHVGNPFG
GVNPNLLVSEINRLMEYNVELSDKYEKDITPPPVCLKQSDLKELYSVQNPVYAYSYYNLLTIQKTPEEIMENLKDIARKA
FYNTLKIIKENYKKYKAIYESKLEADLDIEPKIITFEELYKEVLKENKDFEKYIETAIEKWKEEKLDNQTIGIKIIKETF
EHYKYQQPMIIIAYNVPYYPHRYFDSENPKYTNLLNSLDNMGIYAKEKYNVNIEKENFFMGISDLSYTGLDEKFNIESIC
GNMPGLGYTYKFPEKELKKFDIPSVVFGGFGKDFHKYTERLDIPYSMDIVPELYMYILKEMLQ
>Mature_543_residues
MMMRDKIFKTLDRLVKIPSISGTEKENLAVDEIYNILMDIDYFKNNKSNVKVHNIEGDMHNRCFLTALLEGKKPSKDIII
LTGHLDVVDIDEFGILKNIAFDYKEYTKRVSDLVLDQDSKKDLYSNEWIFGRGTADMKYGLALYIELIRELSKDRDFKGN
ILFLAVPGEESNSEGMLGAIPYLSKLKEDGYNFKSLFLSECCIPKYEGDDAKRIYIGSVGKIMPTFFCVGKATHVGNPFG
GVNPNLLVSEINRLMEYNVELSDKYEKDITPPPVCLKQSDLKELYSVQNPVYAYSYYNLLTIQKTPEEIMENLKDIARKA
FYNTLKIIKENYKKYKAIYESKLEADLDIEPKIITFEELYKEVLKENKDFEKYIETAIEKWKEEKLDNQTIGIKIIKETF
EHYKYQQPMIIIAYNVPYYPHRYFDSENPKYTNLLNSLDNMGIYAKEKYNVNIEKENFFMGISDLSYTGLDEKFNIESIC
GNMPGLGYTYKFPEKELKKFDIPSVVFGGFGKDFHKYTERLDIPYSMDIVPELYMYILKEMLQ

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 63314; Mature: 63314

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMRDKIFKTLDRLVKIPSISGTEKENLAVDEIYNILMDIDYFKNNKSNVKVHNIEGDMH
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
NRCFLTALLEGKKPSKDIIILTGHLDVVDIDEFGILKNIAFDYKEYTKRVSDLVLDQDSK
CCEEEEHHHCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KDLYSNEWIFGRGTADMKYGLALYIELIRELSKDRDFKGNILFLAVPGEESNSEGMLGAI
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEHH
PYLSKLKEDGYNFKSLFLSECCIPKYEGDDAKRIYIGSVGKIMPTFFCVGKATHVGNPFG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHCCCCCC
GVNPNLLVSEINRLMEYNVELSDKYEKDITPPPVCLKQSDLKELYSVQNPVYAYSYYNLL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEE
TIQKTPEEIMENLKDIARKAFYNTLKIIKENYKKYKAIYESKLEADLDIEPKIITFEELY
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
KEVLKENKDFEKYIETAIEKWKEEKLDNQTIGIKIIKETFEHYKYQQPMIIIAYNVPYYP
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
HRYFDSENPKYTNLLNSLDNMGIYAKEKYNVNIEKENFFMGISDLSYTGLDEKFNIESIC
HHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHH
GNMPGLGYTYKFPEKELKKFDIPSVVFGGFGKDFHKYTERLDIPYSMDIVPELYMYILKE
CCCCCCCEEEECCHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MLQ
HHC
>Mature Secondary Structure
MMMRDKIFKTLDRLVKIPSISGTEKENLAVDEIYNILMDIDYFKNNKSNVKVHNIEGDMH
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
NRCFLTALLEGKKPSKDIIILTGHLDVVDIDEFGILKNIAFDYKEYTKRVSDLVLDQDSK
CCEEEEHHHCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KDLYSNEWIFGRGTADMKYGLALYIELIRELSKDRDFKGNILFLAVPGEESNSEGMLGAI
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEHH
PYLSKLKEDGYNFKSLFLSECCIPKYEGDDAKRIYIGSVGKIMPTFFCVGKATHVGNPFG
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCHHHCCCCCC
GVNPNLLVSEINRLMEYNVELSDKYEKDITPPPVCLKQSDLKELYSVQNPVYAYSYYNLL
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEE
TIQKTPEEIMENLKDIARKAFYNTLKIIKENYKKYKAIYESKLEADLDIEPKIITFEELY
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHH
KEVLKENKDFEKYIETAIEKWKEEKLDNQTIGIKIIKETFEHYKYQQPMIIIAYNVPYYP
HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCC
HRYFDSENPKYTNLLNSLDNMGIYAKEKYNVNIEKENFFMGISDLSYTGLDEKFNIESIC
HHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHH
GNMPGLGYTYKFPEKELKKFDIPSVVFGGFGKDFHKYTERLDIPYSMDIVPELYMYILKE
CCCCCCCEEEECCHHHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MLQ
HHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]