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The map label for this gene is yicO [C]

Identifier: 148380857

GI number: 148380857

Start: 3089002

End: 3090444

Strand: Reverse

Name: yicO [C]

Synonym: CBO2901

Alternate gene names: 148380857

Gene position: 3090444-3089002 (Counterclockwise)

Preceding gene: 148380858

Following gene: 148380856

Centisome position: 79.51

GC content: 31.81

Gene sequence:

>1443_bases
ATGTATATGGAGAAGAAAAAAAACTATAAAGAACCTAATAATAAAGGTTTTTTGGACTCATTTTTTAAATTATCAGAACG
TGGTAGTAATATTAAGACTGAGATTATAGCAGGTATTACTACATTTATTACTATGGCATATATAATATTTGTTAATCCAA
GCATATTAATGCAAGCAGGAATGAATTCTAAAGGGCTTGTTGGTGAAGCAGCTGTAAAGGCAGGGATATCTGCTATAAAT
GATCCAGTAGTTGGAGCAGTATTTGCAGCTACTTGTATTTCAGCAGGTATAGGTACTTTAATAATGGCTCTTTACGCTAA
TGTACCTTTCGCACAAGCTCCAGGTATGGGGTTAAATGCCTTTTTTACTTTTAGTGTATGTTTAACTTTAGGATATACTT
GGCAACAAGCTTTAGCAGCAGTATTTATATCTGGATTGCTTTTTATAATTATAACATTAACATCTATAAGAGAAAAAATA
GTAGATGCCCTTCCACAAAATTTAAAATTAGCTATATCTGGTGGAATAGGATTATTTATAGCTTTAGTAGGATTTAAATC
TGGTGGAATAATAGTTGCAAATCCAGCAACACTTATAAGTTTTGGTGATTTTACAAATCCGGCAACTGTATTAACTATAA
TAGGTATTTGTATAACAGCTATTTTGATGGCTAAAAATGTTAAAGGTTCTATGTTAATAGGAATAGTTGTTACTACGCTA
ATAGGAATACCTTTAGGAGTAACAAAAGTAGCAGGAGTAAGTTTTATATCAGCACCACCATCTTTAGCACCAACTTTTTT
AAAATTAGATTTACCAGGACTTTTAGGTTTTGGAGGAGCAGGAATAGTTGGAGCTTTAATGAGCATATTGACAGTTGTTA
TATCTTTTAGCTTAGTAGACATGTTTGATACTATAGGAACTTTAGTTGGAACAGCAGAAAAAGCAGGAATGCTTGATGAA
AATGGAAAAATGGAAGATTTAGATAAAGCACTCTTAGCAGATGCAGTAGCTACTACAGCAGGAGCTTTAATTGGAACAAG
TACTGTTACTACTTATGTAGAATCTACAGCAGGGGTATCAGAAGGTGGAAGAACAGGTTTAACATCCTTTGTTACAGCTA
TTATGTTTTTATTAGCAATGTTTTTTAGTGGACTTGTAGGAATAGTTCCAGCAGAAGCTACAGCACCAGCACTTATAATA
GTAGGTGTATTAATGATGGGAGCTATAACAAAAATAGATTTTAATGATTTTACAGAAGCTCTACCAGCTTTCTTTACTAT
ATCAATAATGCCATTTAGTTATAGTATTGCTAATGGTATAGCAGCAGGAATAATATTTTATCCAATAGTTAAAGTATTTA
CAGGTAAAAGAAAAGAAGTTCATCCAATAGTTTATATATTGGCAGTATTATTCATAATTAGATTTACAATTCTTCCTAAA
TAA

Upstream 100 bases:

>100_bases
TAAGTCCAGTTTATTTATTTGTATATTAAAGTTTTTGTTTTGGATTTACTCATATTTATAATCCGTAAACAAAAACTTTT
TTATTTAGGAGGAGTATTAC

Downstream 100 bases:

>100_bases
ATATATATATATATAAATATAGCCTAAAGAACTATTAATAGTTCTTTAGGCTATATTTGAATTAAAGGAAGCTATATGTA
ATATTATTAAAGCAATATGG

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MYMEKKKNYKEPNNKGFLDSFFKLSERGSNIKTEIIAGITTFITMAYIIFVNPSILMQAGMNSKGLVGEAAVKAGISAIN
DPVVGAVFAATCISAGIGTLIMALYANVPFAQAPGMGLNAFFTFSVCLTLGYTWQQALAAVFISGLLFIIITLTSIREKI
VDALPQNLKLAISGGIGLFIALVGFKSGGIIVANPATLISFGDFTNPATVLTIIGICITAILMAKNVKGSMLIGIVVTTL
IGIPLGVTKVAGVSFISAPPSLAPTFLKLDLPGLLGFGGAGIVGALMSILTVVISFSLVDMFDTIGTLVGTAEKAGMLDE
NGKMEDLDKALLADAVATTAGALIGTSTVTTYVESTAGVSEGGRTGLTSFVTAIMFLLAMFFSGLVGIVPAEATAPALII
VGVLMMGAITKIDFNDFTEALPAFFTISIMPFSYSIANGIAAGIIFYPIVKVFTGKRKEVHPIVYILAVLFIIRFTILPK

Sequences:

>Translated_480_residues
MYMEKKKNYKEPNNKGFLDSFFKLSERGSNIKTEIIAGITTFITMAYIIFVNPSILMQAGMNSKGLVGEAAVKAGISAIN
DPVVGAVFAATCISAGIGTLIMALYANVPFAQAPGMGLNAFFTFSVCLTLGYTWQQALAAVFISGLLFIIITLTSIREKI
VDALPQNLKLAISGGIGLFIALVGFKSGGIIVANPATLISFGDFTNPATVLTIIGICITAILMAKNVKGSMLIGIVVTTL
IGIPLGVTKVAGVSFISAPPSLAPTFLKLDLPGLLGFGGAGIVGALMSILTVVISFSLVDMFDTIGTLVGTAEKAGMLDE
NGKMEDLDKALLADAVATTAGALIGTSTVTTYVESTAGVSEGGRTGLTSFVTAIMFLLAMFFSGLVGIVPAEATAPALII
VGVLMMGAITKIDFNDFTEALPAFFTISIMPFSYSIANGIAAGIIFYPIVKVFTGKRKEVHPIVYILAVLFIIRFTILPK
>Mature_480_residues
MYMEKKKNYKEPNNKGFLDSFFKLSERGSNIKTEIIAGITTFITMAYIIFVNPSILMQAGMNSKGLVGEAAVKAGISAIN
DPVVGAVFAATCISAGIGTLIMALYANVPFAQAPGMGLNAFFTFSVCLTLGYTWQQALAAVFISGLLFIIITLTSIREKI
VDALPQNLKLAISGGIGLFIALVGFKSGGIIVANPATLISFGDFTNPATVLTIIGICITAILMAKNVKGSMLIGIVVTTL
IGIPLGVTKVAGVSFISAPPSLAPTFLKLDLPGLLGFGGAGIVGALMSILTVVISFSLVDMFDTIGTLVGTAEKAGMLDE
NGKMEDLDKALLADAVATTAGALIGTSTVTTYVESTAGVSEGGRTGLTSFVTAIMFLLAMFFSGLVGIVPAEATAPALII
VGVLMMGAITKIDFNDFTEALPAFFTISIMPFSYSIANGIAAGIIFYPIVKVFTGKRKEVHPIVYILAVLFIIRFTILPK

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=472, Percent_Identity=43.0084745762712, Blast_Score=374, Evalue=1e-105,
Organism=Escherichia coli, GI1790150, Length=470, Percent_Identity=42.7659574468085, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1790499, Length=463, Percent_Identity=32.829373650108, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI48994909, Length=464, Percent_Identity=31.0344827586207, Blast_Score=211, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 50103; Mature: 50103

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMEKKKNYKEPNNKGFLDSFFKLSERGSNIKTEIIAGITTFITMAYIIFVNPSILMQAG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
MNSKGLVGEAAVKAGISAINDPVVGAVFAATCISAGIGTLIMALYANVPFAQAPGMGLNA
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FFTFSVCLTLGYTWQQALAAVFISGLLFIIITLTSIREKIVDALPQNLKLAISGGIGLFI
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
ALVGFKSGGIIVANPATLISFGDFTNPATVLTIIGICITAILMAKNVKGSMLIGIVVTTL
HHHHCCCCCEEEECCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGIPLGVTKVAGVSFISAPPSLAPTFLKLDLPGLLGFGGAGIVGALMSILTVVISFSLVD
HHCCCCHHHHHCCHHCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MFDTIGTLVGTAEKAGMLDENGKMEDLDKALLADAVATTAGALIGTSTVTTYVESTAGVS
HHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGGRTGLTSFVTAIMFLLAMFFSGLVGIVPAEATAPALIIVGVLMMGAITKIDFNDFTEA
CCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LPAFFTISIMPFSYSIANGIAAGIIFYPIVKVFTGKRKEVHPIVYILAVLFIIRFTILPK
HHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYMEKKKNYKEPNNKGFLDSFFKLSERGSNIKTEIIAGITTFITMAYIIFVNPSILMQAG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCC
MNSKGLVGEAAVKAGISAINDPVVGAVFAATCISAGIGTLIMALYANVPFAQAPGMGLNA
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
FFTFSVCLTLGYTWQQALAAVFISGLLFIIITLTSIREKIVDALPQNLKLAISGGIGLFI
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHH
ALVGFKSGGIIVANPATLISFGDFTNPATVLTIIGICITAILMAKNVKGSMLIGIVVTTL
HHHHCCCCCEEEECCHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGIPLGVTKVAGVSFISAPPSLAPTFLKLDLPGLLGFGGAGIVGALMSILTVVISFSLVD
HHCCCCHHHHHCCHHCCCCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHH
MFDTIGTLVGTAEKAGMLDENGKMEDLDKALLADAVATTAGALIGTSTVTTYVESTAGVS
HHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EGGRTGLTSFVTAIMFLLAMFFSGLVGIVPAEATAPALIIVGVLMMGAITKIDFNDFTEA
CCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LPAFFTISIMPFSYSIANGIAAGIIFYPIVKVFTGKRKEVHPIVYILAVLFIIRFTILPK
HHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]