| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is cutS [H]
Identifier: 148380808
GI number: 148380808
Start: 3026879
End: 3027367
Strand: Reverse
Name: cutS [H]
Synonym: CBO2850
Alternate gene names: 148380808
Gene position: 3027367-3026879 (Counterclockwise)
Preceding gene: 148380809
Following gene: 148380807
Centisome position: 77.89
GC content: 35.38
Gene sequence:
>489_bases ATGATGGAGGTATTGAGTAAAACAATAATAACCTTAAATATTAATGGAGAATATAAAGAGGTTGTCGCAAAACCCTCAGA CATTTTATTGCACACTCTTCGAAATGAACTAGGACTTACGGGGGCTAAGCCATCTTGTGAAAATGGAGATTGTGGTGCAT GTACTATTCTTGTAGATGGATGGCCTATAAAATCTTGTCTAATGCTAACAGTTGAGGCCATAGGTAAAAAAATAGTTACT GTTGAAGGCTTGAAAAATGCACCAATACAAAAAGCTTTTGTAGATAACTGGGGGTTTCAATGTGGATATTGCACATCAGG GTTTTTAATGGTTTGCCATGCCTTAGCTAATATACATCCGGATGCGGATGACTATGTAATAGAGCAATGGTTGCAATCAA ATCTTTGCCGATGTACTGGATATGAAGAGATAAAAACTGCTATTAAATCAGTTATATCAGATAACCAATCTGAAAATAAC AGTATATAA
Upstream 100 bases:
>100_bases GATGTAATATTAAATGATTTAGCTGGATCTGCTGGTTTTAGAAAATTTATGTTACAAAAAATGCTTGCAAAAGTTTTAGA GAAATTGGAGGGATAAGTGA
Downstream 100 bases:
>100_bases TGGGACTAAAAGGCTTAATTAAGAAGAGAATATACAAAAAAGAAGGCATATTTATTTATAGGCTTTCTTTTTTTATTCAC AAACACAGAATATTCGGTAC
Product: dehydrogenase, [2Fe-2S] binding subunit
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MMEVLSKTIITLNINGEYKEVVAKPSDILLHTLRNELGLTGAKPSCENGDCGACTILVDGWPIKSCLMLTVEAIGKKIVT VEGLKNAPIQKAFVDNWGFQCGYCTSGFLMVCHALANIHPDADDYVIEQWLQSNLCRCTGYEEIKTAIKSVISDNQSENN SI
Sequences:
>Translated_162_residues MMEVLSKTIITLNINGEYKEVVAKPSDILLHTLRNELGLTGAKPSCENGDCGACTILVDGWPIKSCLMLTVEAIGKKIVT VEGLKNAPIQKAFVDNWGFQCGYCTSGFLMVCHALANIHPDADDYVIEQWLQSNLCRCTGYEEIKTAIKSVISDNQSENN SI >Mature_162_residues MMEVLSKTIITLNINGEYKEVVAKPSDILLHTLRNELGLTGAKPSCENGDCGACTILVDGWPIKSCLMLTVEAIGKKIVT VEGLKNAPIQKAFVDNWGFQCGYCTSGFLMVCHALANIHPDADDYVIEQWLQSNLCRCTGYEEIKTAIKSVISDNQSENN SI
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=159, Percent_Identity=32.7044025157233, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1786480, Length=169, Percent_Identity=35.5029585798817, Blast_Score=106, Evalue=8e-25, Organism=Escherichia coli, GI1789232, Length=146, Percent_Identity=41.7808219178082, Blast_Score=92, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17539860, Length=161, Percent_Identity=36.0248447204969, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17540638, Length=162, Percent_Identity=38.2716049382716, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI32566215, Length=163, Percent_Identity=34.9693251533742, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI17737937, Length=162, Percent_Identity=32.7160493827161, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI24647197, Length=168, Percent_Identity=37.5, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24647195, Length=168, Percent_Identity=37.5, Blast_Score=86, Evalue=8e-18, Organism=Drosophila melanogaster, GI24647199, Length=142, Percent_Identity=39.4366197183099, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI24647201, Length=161, Percent_Identity=38.5093167701863, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI24647193, Length=165, Percent_Identity=35.7575757575758, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 17743; Mature: 17743
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEVLSKTIITLNINGEYKEVVAKPSDILLHTLRNELGLTGAKPSCENGDCGACTILVDG CHHHHCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC WPIKSCLMLTVEAIGKKIVTVEGLKNAPIQKAFVDNWGFQCGYCTSGFLMVCHALANIHP CCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DADDYVIEQWLQSNLCRCTGYEEIKTAIKSVISDNQSENNSI CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMEVLSKTIITLNINGEYKEVVAKPSDILLHTLRNELGLTGAKPSCENGDCGACTILVDG CHHHHCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC WPIKSCLMLTVEAIGKKIVTVEGLKNAPIQKAFVDNWGFQCGYCTSGFLMVCHALANIHP CCHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC DADDYVIEQWLQSNLCRCTGYEEIKTAIKSVISDNQSENNSI CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]