| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is ppaC [H]
Identifier: 148380593
GI number: 148380593
Start: 2788220
End: 2789863
Strand: Direct
Name: ppaC [H]
Synonym: CBO2635
Alternate gene names: 148380593
Gene position: 2788220-2789863 (Clockwise)
Preceding gene: 148380573
Following gene: 148380633
Centisome position: 71.73
GC content: 29.56
Gene sequence:
>1644_bases ATGAAAGACCTTATTTATATAACAGGACATAGAAATCCTGATTCTGACTCTATCTGTGCCTCTTTAGGATACGCAGATTT TAAAAAACAATTAGGCTTTGAAAACATAGTATCCGGAAGACTTGGAGAGTTAAACAATGAAACAAAATTTGTTTTAGATT ATTTTAACGTTGAAGCTCCAACTCTTATAGATACAGTAAAAACACAAGTTTCTGATTTAGATATAGATAAAGTTACTCCT ATATCTAAAGATTTATCTTTAAAAAAAGCTTGGACTATAATGGAAGAAAATAATGTTAAGACCTTGCCTTTACAGGATGA AGAAGGTAAATTGATTGGTTTAGCTTCCCTATCTAATATAAGTTCTACTTATATGGGAGTATGGCAAAAGGACATATTAG CTAAAAGTAATGCTAATATAGAAGATATTATAGATACTTTGAATGCTAAAATTGCTTATAAAAAAGAAGAAAAGCAAAAA TTCACAGGTAATTTAGTAGTAGCTGCTATGGAAGCTAATGATATTAAAAATTATGTTAAAGAAGGAGATATAGTTATCCT TGGAAACAGAGAAGATTCTCAAGAGACTGCTTTAGATTGCAAAGCCCATCTATTAGTTGTTACAGGTTCCCATAAAGTAT CAGATAAAATATTAAATAAAGCAAAAGATTTAGGATGCTCTATATTAATATCAGAGGAAGATACCTTTACAACATCAGTA CTTATAACTCAAAGCATACCTGTTAGCTATATTATGACTTCTTCTGATATAATAAGCTTCAAGCTTTCTGATTTTGTAGA AGATATTAAAGAAGTTATGTTAAAAACAAGATTTAGAAGCTATCCTGTAGTAGACCAAAACAACAAAATAGTAGGAACTA TTTCAAGATATCATTTAATATCACCTAAAAAGAAAAAGGTTATATTAGTAGACCACAATGAAATTGGTCAATCTGTACCA GGCTTAGAAGAAGCTGAAATAATGGAAATAATAGATCATCATAGAATCGGTGGAGTTAATACTGCATCCCCTATATTCTT TAGAAATCAACCAGTAGGAAGTACATCTACTATAATTGCAAATATGTTCTTTGAGAATAATATTACACCATCAAAAGAAA TAGCTGGTTTATTAGCCTCTGCAATTATATCTGATACATTATTATTTAAATCACCAACTTCCACAGAATTAGATAAAACA ATCTTAGACAAATTAGCTAAAATAGCAGAAATAGATCCTAAAAGCTATTCCGTAGAGATGTTTAAAGCAGGTACATCCTT AAAAGGAAAAACTGTAGAAGGATTATTTCATGAAGATTTTAAGAACTTTACTATAGGTGGAGGGAAAATAGGTGTATCTC AAGTATCCACTATGGATCCTTCAAGTTTCGACCCATTAAAAAAAGATATGTTAAATTTAATGGAATCAAAAGTAAAAAAG GAAGGCTATGAAGGATTAATTTTAGTATTAACTGACCTACTAAAGGAAGGTTCTTTTATATATGTTATAGGACCTAAAAA AGAAATTATAGCTTCAGCCTTTGGAAAATCCTTAGATAAAGATAGTTCCTTATATGCTGAGGGAGTATTATCAAGAAAAA AACAAGTAATACCACCAATTACCAATGCAATAGAAAATAAGTAA
Upstream 100 bases:
>100_bases TATTAATAAAATTTAGAAATTTGAACTTAATGTTCATTTTTATGATAAAATAGTTAATACTGAAATTTATTATATAAAAT ATCATTAGGAGGAAATTTAA
Downstream 100 bases:
>100_bases ACAGCTTTTATTTATTCAAAAGAGTATCAAAATAAATTTAATTTTAGTTTGGCGCTCAGTCTTTTAAAAACTTATCATAT CAAATTAATATAATAAAATA
Product: putative manganese-dependent inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKDLIYITGHRNPDSDSICASLGYADFKKQLGFENIVSGRLGELNNETKFVLDYFNVEAPTLIDTVKTQVSDLDIDKVTP ISKDLSLKKAWTIMEENNVKTLPLQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKKEEKQK FTGNLVVAAMEANDIKNYVKEGDIVILGNREDSQETALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV LITQSIPVSYIMTSSDIISFKLSDFVEDIKEVMLKTRFRSYPVVDQNNKIVGTISRYHLISPKKKKVILVDHNEIGQSVP GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGLLASAIISDTLLFKSPTSTELDKT ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKKDMLNLMESKVKK EGYEGLILVLTDLLKEGSFIYVIGPKKEIIASAFGKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK
Sequences:
>Translated_547_residues MKDLIYITGHRNPDSDSICASLGYADFKKQLGFENIVSGRLGELNNETKFVLDYFNVEAPTLIDTVKTQVSDLDIDKVTP ISKDLSLKKAWTIMEENNVKTLPLQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKKEEKQK FTGNLVVAAMEANDIKNYVKEGDIVILGNREDSQETALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV LITQSIPVSYIMTSSDIISFKLSDFVEDIKEVMLKTRFRSYPVVDQNNKIVGTISRYHLISPKKKKVILVDHNEIGQSVP GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGLLASAIISDTLLFKSPTSTELDKT ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKKDMLNLMESKVKK EGYEGLILVLTDLLKEGSFIYVIGPKKEIIASAFGKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK >Mature_547_residues MKDLIYITGHRNPDSDSICASLGYADFKKQLGFENIVSGRLGELNNETKFVLDYFNVEAPTLIDTVKTQVSDLDIDKVTP ISKDLSLKKAWTIMEENNVKTLPLQDEEGKLIGLASLSNISSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKKEEKQK FTGNLVVAAMEANDIKNYVKEGDIVILGNREDSQETALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV LITQSIPVSYIMTSSDIISFKLSDFVEDIKEVMLKTRFRSYPVVDQNNKIVGTISRYHLISPKKKKVILVDHNEIGQSVP GLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIANMFFENNITPSKEIAGLLASAIISDTLLFKSPTSTELDKT ILDKLAKIAEIDPKSYSVEMFKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKKDMLNLMESKVKK EGYEGLILVLTDLLKEGSFIYVIGPKKEIIASAFGKSLDKDSSLYAEGVLSRKKQVIPPITNAIENK
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001807 - InterPro: IPR000644 - InterPro: IPR004097 - InterPro: IPR010766 - InterPro: IPR001667 [H]
Pfam domain/function: PF00571 CBS; PF01368 DHH; PF02833 DHHA2; PF07085 DRTGG [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 60397; Mature: 60397
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLIYITGHRNPDSDSICASLGYADFKKQLGFENIVSGRLGELNNETKFVLDYFNVEAP CCCEEEEECCCCCCCCHHHHHCCHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCC TLIDTVKTQVSDLDIDKVTPISKDLSLKKAWTIMEENNVKTLPLQDEEGKLIGLASLSNI HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCEEECCCCCCCCCEEEEEEHHHH SSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKKEEKQKFTGNLVVAAMEANDIKNYVK HHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECHHHHHHHHH EGDIVILGNREDSQETALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV CCCEEEEECCCCCHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE LITQSIPVSYIMTSSDIISFKLSDFVEDIKEVMLKTRFRSYPVVDQNNKIVGTISRYHLI EEEECCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC SPKKKKVILVDHNEIGQSVPGLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIA CCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHE NMFFENNITPSKEIAGLLASAIISDTLLFKSPTSTELDKTILDKLAKIAEIDPKSYSVEM EHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE FKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKKDMLNLMESKVKK EECCCCCCCCCCHHHHHHCCCCEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EGYEGLILVLTDLLKEGSFIYVIGPKKEIIASAFGKSLDKDSSLYAEGVLSRKKQVIPPI CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH TNAIENK HHHHCCC >Mature Secondary Structure MKDLIYITGHRNPDSDSICASLGYADFKKQLGFENIVSGRLGELNNETKFVLDYFNVEAP CCCEEEEECCCCCCCCHHHHHCCHHHHHHHCCHHHHHCCCCCCCCCCCEEEEEEECCCCC TLIDTVKTQVSDLDIDKVTPISKDLSLKKAWTIMEENNVKTLPLQDEEGKLIGLASLSNI HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCEEECCCCCCCCCEEEEEEHHHH SSTYMGVWQKDILAKSNANIEDIIDTLNAKIAYKKEEKQKFTGNLVVAAMEANDIKNYVK HHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCHHHHHCCCCEEEEEECHHHHHHHHH EGDIVILGNREDSQETALDCKAHLLVVTGSHKVSDKILNKAKDLGCSILISEEDTFTTSV CCCEEEEECCCCCHHHHHCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCEEEEE LITQSIPVSYIMTSSDIISFKLSDFVEDIKEVMLKTRFRSYPVVDQNNKIVGTISRYHLI EEEECCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC SPKKKKVILVDHNEIGQSVPGLEEAEIMEIIDHHRIGGVNTASPIFFRNQPVGSTSTIIA CCCCCEEEEEECHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHE NMFFENNITPSKEIAGLLASAIISDTLLFKSPTSTELDKTILDKLAKIAEIDPKSYSVEM EHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEE FKAGTSLKGKTVEGLFHEDFKNFTIGGGKIGVSQVSTMDPSSFDPLKKDMLNLMESKVKK EECCCCCCCCCCHHHHHHCCCCEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH EGYEGLILVLTDLLKEGSFIYVIGPKKEIIASAFGKSLDKDSSLYAEGVLSRKKQVIPPI CCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCH TNAIENK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]