| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380569
Identifier: 148380569
GI number: 148380569
Start: 2761906
End: 2762589
Strand: Reverse
Name: 148380569
Synonym: CBO2613A
Alternate gene names: NA
Gene position: 2762589-2761906 (Counterclockwise)
Preceding gene: 148380570
Following gene: 148380568
Centisome position: 71.07
GC content: 27.49
Gene sequence:
>684_bases ATGACTAGGATACCTGTACCTTATAAGACTAAAACTAGGCTTATGAAAATATTGACAGGGCAGCAGTGTGCAGATATACA TAAATGCTTTTTAAAGGATGTATTTAATATGTGTAAATCCTTAAAAGAGAGTATGGATATATATGTAACTTACGGTGATG AAGGGGGTTTTAGTATAATAGAACCTTTAGTACCAAGTTTTGCTAGAGTTTTCCCCCAAAAAGGCAAAGATATAGGACAA AGAATGGAAAATGCTGTAGGTGAGGTTTTAAAAAAAGGTTATGAAAAAGTTGTTTTAATAGGATCTGATATACCAGAGAT TCAGATCAAGGATATATTAAGGGCTTTTGATATTTTAGAATATAAAGATTTATGTTTTGGACCTACATTTGATGGAGGTT ATTATCTTGTAGGTATGAAAAAATTAAATAAAATAGTTTTTAAAAAGGATATAAAATGGGGAGATAAATCTGTATTTTAT AGTACTATGGATTTATTAAATAAAGAAAATTTAACAGTAGATTTTACAGAAAAATATGAAGATATAGACACAAAAGAAGA CCTTAAGAACTTGATTTATAGATTAAATTACAAATTATATAAGTATGATATTATACCTAAAAATACTAAGAAGTATTTAG AAAATTGGTGGAGAGATGAAGATGCTGAAAGATATGTTGATTAA
Upstream 100 bases:
>100_bases TTCTAATGCATAAATTAAGAATTTTATATTTTATGAGAGTACCTACAGAAAAATTAAATAAAATATATCGGGAGGAAAGG TAATGAATGCACTTATAATA
Downstream 100 bases:
>100_bases AGAAATAAGAGAATATGTTTATCATAAAAATTTGTTTAAAATAATAAATTTAAGTAAAAGTTTTAATGTTAGATTTTTAG CACAGGGTGAATATAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQKGKDIGQ RMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFY STMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNYKLYKYDIIPKNTKKYLENWWRDEDAERYVD
Sequences:
>Translated_227_residues MTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQKGKDIGQ RMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFY STMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNYKLYKYDIIPKNTKKYLENWWRDEDAERYVD >Mature_226_residues TRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSIIEPLVPSFARVFPQKGKDIGQR MENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILEYKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFYS TMDLLNKENLTVDFTEKYEDIDTKEDLKNLIYRLNYKLYKYDIIPKNTKKYLENWWRDEDAERYVD
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26681; Mature: 26550
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSII CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH EPLVPSFARVFPQKGKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH YKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFYSTMDLLNKENLTVDFTEKYE HHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHC DIDTKEDLKNLIYRLNYKLYKYDIIPKNTKKYLENWWRDEDAERYVD CCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure TRIPVPYKTKTRLMKILTGQQCADIHKCFLKDVFNMCKSLKESMDIYVTYGDEGGFSII CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH EPLVPSFARVFPQKGKDIGQRMENAVGEVLKKGYEKVVLIGSDIPEIQIKDILRAFDILE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH YKDLCFGPTFDGGYYLVGMKKLNKIVFKKDIKWGDKSVFYSTMDLLNKENLTVDFTEKYE HHHHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHC DIDTKEDLKNLIYRLNYKLYKYDIIPKNTKKYLENWWRDEDAERYVD CCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA