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The map label for this gene is spoIIGA [H]

Identifier: 148380491

GI number: 148380491

Start: 2671924

End: 2672721

Strand: Reverse

Name: spoIIGA [H]

Synonym: CBO2534

Alternate gene names: 148380491

Gene position: 2672721-2671924 (Counterclockwise)

Preceding gene: 148380492

Following gene: 148380490

Centisome position: 68.76

GC content: 25.94

Gene sequence:

>798_bases
TTGGTGGTTTATTTAGATATTATGATACTAGAAAATTTTATTGTAAACCTGTTTATACTATTTCTAACTTCTCAAACTTT
AAAGGTCAACAATAAAATTCTATATTTATTAATATCTTCATTTTTAGGAAGCTTATATGTAGTGGTACTTATTATACCTT
CTCTTGCAATATTTAATAAGCTTATATTTAAAATTCTAATAGCTTTTATACTGATTTTGATAGCCTTTAGGAAAAGAGAT
CTAATATTTAATATAAAAGCTACAGGAGTTTATATAGTTTATTCAATGATTATTGCTGGTATATGTGTTTTCTTAGAATG
CAATAAAATGAATTCTCAAACTTACTTATTTATAGAAAATTTTTCTTATAAAAAGCTTATGATTTCTATGATGACTATAT
ATATTATTGGAAATAAACTAATATGGTATATAAAAGACAGAAAAGATATAAGTAGTTTTATATATGATGTAGATATAATT
CTTCAACAGGATCATAGAAGGGTTAAAGCATTTCTAGATACGGGTAATGAGCTTAGAGAGCCTGCTACAAATCTCCCCGT
ATTGGTGGTAGAAAAAGATGTTTTTAGTAATGTGAATTTAGATACCTATGATAAATTTTATATACCTTATAGGGTCGTAA
ATGGTAATTTTGGTAATCTTGAAGGATTTAGACCTAATTATATAGATGTCCATGTAGGAGACAAAAAGGAAAAAAAAGAA
GTTATAATAGCACTTTCAGAAGGTAAACTTAGTGGTATAAAAGACTATAGAGCACTTTTATCCCGAGGAATTATATAG

Upstream 100 bases:

>100_bases
CGATAAAAACATAACATTTTTATATGAATTGACAAATTTTTGAAATATTTAATTGTATAATAGTAAATAAATGGCAGTAG
TTTAAGGGGGGAGATAACTA

Downstream 100 bases:

>100_bases
GAGGGACTTTTATGATAAATTTAAAGGTATTATTAAACAGAATATTAATAAAATTTAAATTGTTTTTTAAAAGCGTTTAT
TACATAGGTGGGAATGATGC

Product: sporulation factor SpoIIGA

Products: NA

Alternate protein names: Stage II sporulation protein GA [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVVYLDIMILENFIVNLFILFLTSQTLKVNNKILYLLISSFLGSLYVVVLIIPSLAIFNKLIFKILIAFILILIAFRKRD
LIFNIKATGVYIVYSMIIAGICVFLECNKMNSQTYLFIENFSYKKLMISMMTIYIIGNKLIWYIKDRKDISSFIYDVDII
LQQDHRRVKAFLDTGNELREPATNLPVLVVEKDVFSNVNLDTYDKFYIPYRVVNGNFGNLEGFRPNYIDVHVGDKKEKKE
VIIALSEGKLSGIKDYRALLSRGII

Sequences:

>Translated_265_residues
MVVYLDIMILENFIVNLFILFLTSQTLKVNNKILYLLISSFLGSLYVVVLIIPSLAIFNKLIFKILIAFILILIAFRKRD
LIFNIKATGVYIVYSMIIAGICVFLECNKMNSQTYLFIENFSYKKLMISMMTIYIIGNKLIWYIKDRKDISSFIYDVDII
LQQDHRRVKAFLDTGNELREPATNLPVLVVEKDVFSNVNLDTYDKFYIPYRVVNGNFGNLEGFRPNYIDVHVGDKKEKKE
VIIALSEGKLSGIKDYRALLSRGII
>Mature_265_residues
MVVYLDIMILENFIVNLFILFLTSQTLKVNNKILYLLISSFLGSLYVVVLIIPSLAIFNKLIFKILIAFILILIAFRKRD
LIFNIKATGVYIVYSMIIAGICVFLECNKMNSQTYLFIENFSYKKLMISMMTIYIIGNKLIWYIKDRKDISSFIYDVDII
LQQDHRRVKAFLDTGNELREPATNLPVLVVEKDVFSNVNLDTYDKFYIPYRVVNGNFGNLEGFRPNYIDVHVGDKKEKKE
VIIALSEGKLSGIKDYRALLSRGII

Specific function: Probably activates RNA polymerase sigma-E factor at the stage II of sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005081 [H]

Pfam domain/function: PF03419 Peptidase_U4 [H]

EC number: NA

Molecular weight: Translated: 30676; Mature: 30676

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVYLDIMILENFIVNLFILFLTSQTLKVNNKILYLLISSFLGSLYVVVLIIPSLAIFNK
CEEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFKILIAFILILIAFRKRDLIFNIKATGVYIVYSMIIAGICVFLECNKMNSQTYLFIEN
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEC
FSYKKLMISMMTIYIIGNKLIWYIKDRKDISSFIYDVDIILQQDHRRVKAFLDTGNELRE
CCHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHEEEHHHHHHHHHHCCCHHHHC
PATNLPVLVVEKDVFSNVNLDTYDKFYIPYRVVNGNFGNLEGFRPNYIDVHVGDKKEKKE
CCCCCCEEEEEHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCE
VIIALSEGKLSGIKDYRALLSRGII
EEEEECCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVVYLDIMILENFIVNLFILFLTSQTLKVNNKILYLLISSFLGSLYVVVLIIPSLAIFNK
CEEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFKILIAFILILIAFRKRDLIFNIKATGVYIVYSMIIAGICVFLECNKMNSQTYLFIEN
HHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEC
FSYKKLMISMMTIYIIGNKLIWYIKDRKDISSFIYDVDIILQQDHRRVKAFLDTGNELRE
CCHHHHHHHHHHHHEECCEEEEEEECHHHHHHHHHHHHHEEEHHHHHHHHHHCCCHHHHC
PATNLPVLVVEKDVFSNVNLDTYDKFYIPYRVVNGNFGNLEGFRPNYIDVHVGDKKEKKE
CCCCCCEEEEEHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCE
VIIALSEGKLSGIKDYRALLSRGII
EEEEECCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961408; 7883192; 11466286 [H]