| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is yugP [H]
Identifier: 148380462
GI number: 148380462
Start: 2643998
End: 2644681
Strand: Reverse
Name: yugP [H]
Synonym: CBO2508
Alternate gene names: 148380462
Gene position: 2644681-2643998 (Counterclockwise)
Preceding gene: 148380463
Following gene: 148380461
Centisome position: 68.04
GC content: 33.48
Gene sequence:
>684_bases ATGTTTTATTATGATAGTACATTTTTGATATTGATTCCTGCTATGCTCATAGCGGCATGGGCTCAATTAAAAGTATCTTC ATCTTTTGATAGATACTCAAGGGTTTCAACAGCTAAGGGATATACAGGGGCTCAGGTAGCCAGAATGCTCTTGGATTCTA AAGGTCTTTATAATGTACCTGTGGAACTTATACCAGGAAAACTTTCTGATCATTATGACCCTAGTAAAAGGGTTATGAGA CTTTCGAAAGATGTATATTATGGAAATTCAGTAGCATCTATTGGAGTAGCAGCTCACGAAACAGGTCATGCTATACAGCA TTTAGAAAGTTATTCTCCTCTTGTAATAAGAAACACTATAGTTCCTATAGTAAATATTAGTTCCCAAGCTTCTTGGATAT TGTTTTTTATAGGTATATTAATGGGAGCTTCTAGTCTTACAAGAATAGGGATAATTCTTTTTTCAGCAGTAGTTTTATTT CAACTTATAACATTACCTGTAGAATTTGATGCTTCAAAAAGAGCATTGGTTTTATTAGAAAACAAAGGTATACTATATAA GGAAGAAGTAAATGGAGCAAAAAAAGTGTTAAGTGCAGCGGCTATGACATATATAGCAGCGGCATTGACGGCTATATCAC AATTAGTAAGACTTATAGTTTTAAGCAATAGACGAAATGATTAA
Upstream 100 bases:
>100_bases TATATTTAAGGTTGTAATAAGAGGATATAGGATGAAATAAAAGGAGGTGAACTTTAGTAGGAGAGTGTTGATAGAAGACT TTCTTACTAAAGATAACAAT
Downstream 100 bases:
>100_bases GAGAAAGGTTTAAGGATATAATGGATAATGCAAGAGAAGTAGCTTTGGATGTATTAAAGGCTGTATTATTTGAAGGTGCT TATTCAAACATAGTTTTAAG
Product: putative neutral zinc metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVPVELIPGKLSDHYDPSKRVMR LSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTIVPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLF QLITLPVEFDASKRALVLLENKGILYKEEVNGAKKVLSAAAMTYIAAALTAISQLVRLIVLSNRRND
Sequences:
>Translated_227_residues MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVPVELIPGKLSDHYDPSKRVMR LSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTIVPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLF QLITLPVEFDASKRALVLLENKGILYKEEVNGAKKVLSAAAMTYIAAALTAISQLVRLIVLSNRRND >Mature_227_residues MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVPVELIPGKLSDHYDPSKRVMR LSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTIVPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLF QLITLPVEFDASKRALVLLENKGILYKEEVNGAKKVLSAAAMTYIAAALTAISQLVRLIVLSNRRND
Specific function: Unknown
COG id: COG2738
COG function: function code R; Predicted Zn-dependent protease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007395 [H]
Pfam domain/function: PF04298 Zn_peptidase_2 [H]
EC number: NA
Molecular weight: Translated: 24931; Mature: 24931
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVP CEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC VELIPGKLSDHYDPSKRVMRLSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTI CEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCE VPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLFQLITLPVEFDASKRALVLLE EEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEE NKGILYKEEVNGAKKVLSAAAMTYIAAALTAISQLVRLIVLSNRRND CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVP CEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC VELIPGKLSDHYDPSKRVMRLSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTI CEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCE VPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLFQLITLPVEFDASKRALVLLE EEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEE NKGILYKEEVNGAKKVLSAAAMTYIAAALTAISQLVRLIVLSNRRND CCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]