| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380418
Identifier: 148380418
GI number: 148380418
Start: 2593847
End: 2594725
Strand: Reverse
Name: 148380418
Synonym: CBO2460
Alternate gene names: NA
Gene position: 2594725-2593847 (Counterclockwise)
Preceding gene: 148380420
Following gene: 148380417
Centisome position: 66.76
GC content: 31.4
Gene sequence:
>879_bases ATGGTAAAAGTAGTTTTGGGTCTTTTAATTATTTTAACAATCTTTTTTGCAGTTGCATTTTTAAGAGATTATATTAAAGC AACTAAAGAAGGAAACATTGAAAAAACTAATTTTTTCGCATTAGGAGTAGTAGGATTTATTACTAATTTTTTTGATACTT TAGGAATAGGTAGTTTTTCTCCTACTACAGCATTACTTAAAAATTTTAAACTTTCTAAGGATAGAACTTTACCGGGTACA TTAAATGTTGCTTGTACTGTACCAGTTGCTGCAGAGGCTATTTTATTTATAAATGGTATAGAAGTAGAACCTGTAACATT ATTTTCTTTATTAATAGCAGCTACAGTAGGCGCAGTAGTAGCTGCAGGAGTTGTATCTAAATTAGATGAGAGAAAAGTTC AGTTTGCTATGGGAACCGCTCTTATAATAGTGGCTTTAGTAATGCTTGCAGGAAAATTAAATCTAATGCCAGCAGGTGGA GATGCAGTTGGACTTCATGGTGCAAAACTTATAATAGCAATAATAGGTAATTTTATATTAGGTGCTTTAATGACTTTAGG AATAGGATTATATGCTCCATGTATGGCTTTAGTATATTCTTTAGGGATGAGTCCAAAGGTTGCTTTCCCAATAATGATGG GATCTTGCGCATTTTTAATGCCAGCAGCATCACTTAAGTTTATAAAAGAAGGAGCTTATGACAGAAAAGCATCTATGGCT ATAACTGTATTTGGTCTAGTAGGTGTATTTATAGCATATTATTTAGTGAAATCATTACCATTAAATATACTAACATGGTT AGTAATTGTTGTTATAATTTACACTTCAGCTATGATGTTTAAATCAGCTTCTAAAGCTAGAAAAACAGTAAAGGCTTAA
Upstream 100 bases:
>100_bases TGTTAAAAAAATATCAAAAAATATGAAAAAATCTATAGAAAAAAACATGAATTTGTATTAAAATTATATTGTAAAAATTA AATCAAAAGGGGTGTAGGAA
Downstream 100 bases:
>100_bases AGATGATGTTTTAGATTTAAATTATATTTGTAAAGCTTTTAAATATTGAATGCTGAAAACCAGGTGAAATTTAAATTTTA CCTGGTTTTTTTTCAAGTTT
Product: membrane protein
Products: NA
Alternate protein names: Membrane Family Protein; Permease; Na+/Solute Symporter
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MVKVVLGLLIILTIFFAVAFLRDYIKATKEGNIEKTNFFALGVVGFITNFFDTLGIGSFSPTTALLKNFKLSKDRTLPGT LNVACTVPVAAEAILFINGIEVEPVTLFSLLIAATVGAVVAAGVVSKLDERKVQFAMGTALIIVALVMLAGKLNLMPAGG DAVGLHGAKLIIAIIGNFILGALMTLGIGLYAPCMALVYSLGMSPKVAFPIMMGSCAFLMPAASLKFIKEGAYDRKASMA ITVFGLVGVFIAYYLVKSLPLNILTWLVIVVIIYTSAMMFKSASKARKTVKA
Sequences:
>Translated_292_residues MVKVVLGLLIILTIFFAVAFLRDYIKATKEGNIEKTNFFALGVVGFITNFFDTLGIGSFSPTTALLKNFKLSKDRTLPGT LNVACTVPVAAEAILFINGIEVEPVTLFSLLIAATVGAVVAAGVVSKLDERKVQFAMGTALIIVALVMLAGKLNLMPAGG DAVGLHGAKLIIAIIGNFILGALMTLGIGLYAPCMALVYSLGMSPKVAFPIMMGSCAFLMPAASLKFIKEGAYDRKASMA ITVFGLVGVFIAYYLVKSLPLNILTWLVIVVIIYTSAMMFKSASKARKTVKA >Mature_292_residues MVKVVLGLLIILTIFFAVAFLRDYIKATKEGNIEKTNFFALGVVGFITNFFDTLGIGSFSPTTALLKNFKLSKDRTLPGT LNVACTVPVAAEAILFINGIEVEPVTLFSLLIAATVGAVVAAGVVSKLDERKVQFAMGTALIIVALVMLAGKLNLMPAGG DAVGLHGAKLIIAIIGNFILGALMTLGIGLYAPCMALVYSLGMSPKVAFPIMMGSCAFLMPAASLKFIKEGAYDRKASMA ITVFGLVGVFIAYYLVKSLPLNILTWLVIVVIIYTSAMMFKSASKARKTVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30932; Mature: 30932
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVVLGLLIILTIFFAVAFLRDYIKATKEGNIEKTNFFALGVVGFITNFFDTLGIGSFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PTTALLKNFKLSKDRTLPGTLNVACTVPVAAEAILFINGIEVEPVTLFSLLIAATVGAVV HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH AAGVVSKLDERKVQFAMGTALIIVALVMLAGKLNLMPAGGDAVGLHGAKLIIAIIGNFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHH GALMTLGIGLYAPCMALVYSLGMSPKVAFPIMMGSCAFLMPAASLKFIKEGAYDRKASMA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ITVFGLVGVFIAYYLVKSLPLNILTWLVIVVIIYTSAMMFKSASKARKTVKA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVKVVLGLLIILTIFFAVAFLRDYIKATKEGNIEKTNFFALGVVGFITNFFDTLGIGSFS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PTTALLKNFKLSKDRTLPGTLNVACTVPVAAEAILFINGIEVEPVTLFSLLIAATVGAVV HHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHH AAGVVSKLDERKVQFAMGTALIIVALVMLAGKLNLMPAGGDAVGLHGAKLIIAIIGNFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHH GALMTLGIGLYAPCMALVYSLGMSPKVAFPIMMGSCAFLMPAASLKFIKEGAYDRKASMA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ITVFGLVGVFIAYYLVKSLPLNILTWLVIVVIIYTSAMMFKSASKARKTVKA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA