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The map label for this gene is smf [H]

Identifier: 148380396

GI number: 148380396

Start: 2571732

End: 2572817

Strand: Reverse

Name: smf [H]

Synonym: CBO2438

Alternate gene names: 148380396

Gene position: 2572817-2571732 (Counterclockwise)

Preceding gene: 148380399

Following gene: 148380395

Centisome position: 66.19

GC content: 27.35

Gene sequence:

>1086_bases
ATGGTAGAGTTAAATTTATGGTACGCTAATGCGAAGGTTTCAAACAATATAAAAACAAAATTATTACAAGAGTTTAAATC
TGTGTCTAATATATTTGACTATGTACAAAATTTTAGATATAAGGAAAATATAAATAAAAATATAGTTAAAGTAATAAATA
ACTTTAAAATAGCCTGGAACAAAGAAAAAATAAAAAATATGAAAAATAAGATATTACAAGATAATATTAAGATAATAAAT
TACATGGAAAAAGAGTATCCATCCCAATTAAGAAACTATGAGGATGCACCAGCTGTGTTGTTTTATAAAGGAAATATAGA
AAAATTGAATATTCTTAAAAGTGCCGCTATTGTAGGTTCTAGAAAGTGTTCTACCTATGGTATGAAGGTAACAAAAATTA
TAAGTGAAACTTTGGCAGATAATAATATAATGGTAGTTAGTGGCATGGCTACGGGTATAGATTACTATGCTCATTTATAT
TGTATCGAGAATAAGGGCTTTACTACAGCAATTTTAGGTAGTGGTATTGATGTTGTATATCCAAAGCAAAATAAAAAAAT
ATATGATATTATAAGTGAGGATGGATGTATAATATCTGAATTCTTACCAGGAACACCACCGTTATCCTATAATTTTCCTA
GGCGAAATAGAATAATTAGTGGTTTAAGTGATATAGTAATAGTTGTAGAAGCAGGAGAAAAGAGTGGATCATTAATAACT
ACAGAAATAGCTTTAGAACAAGGAAAAGATGTAGTGGCAGTTCCAGGCTCTATATTCTCTAGAGAAAGCATAGGTACAAA
TAAAATTATAAAAGAAGGTGCTTATGTATTTACAACTGTAGAAGATATATTAAATTATATGGGTATAGAAAAAATAAAAA
TAAATAATAATAAAGATAATAAGATGGCTTTAAAGGACAGCTTACAGGCAAAAGTTTACAATGTATTAAGCGATGAACCT
AAGCATATAGATGACCTGTTAAAATTAATGGATATTGACATAAAACATTTATATGAGGTATTATTTGAATTGCAGCTAAA
AAAAGAAATAATTTGTTTGGCTGGCAACTATTATGTTAAATCCTAA

Upstream 100 bases:

>100_bases
ATAAGTATTTCCAAATATTTATTTTTTTTATATTGTAAAAGTGAATAAAAAAATAATATTTGACTACAATTTAAAGATAA
AATTATAAAAAGGTGATAAA

Downstream 100 bases:

>100_bases
TGGGTAGAGTATAATATAAAAATATAGAGTTTATATATTGCACATAAAAGTGTTTATAGGTATATATAAATATTATAAAA
ACCTGTTTATTCTAGTGCCA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MVELNLWYANAKVSNNIKTKLLQEFKSVSNIFDYVQNFRYKENINKNIVKVINNFKIAWNKEKIKNMKNKILQDNIKIIN
YMEKEYPSQLRNYEDAPAVLFYKGNIEKLNILKSAAIVGSRKCSTYGMKVTKIISETLADNNIMVVSGMATGIDYYAHLY
CIENKGFTTAILGSGIDVVYPKQNKKIYDIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSGSLIT
TEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINNNKDNKMALKDSLQAKVYNVLSDEP
KHIDDLLKLMDIDIKHLYEVLFELQLKKEIICLAGNYYVKS

Sequences:

>Translated_361_residues
MVELNLWYANAKVSNNIKTKLLQEFKSVSNIFDYVQNFRYKENINKNIVKVINNFKIAWNKEKIKNMKNKILQDNIKIIN
YMEKEYPSQLRNYEDAPAVLFYKGNIEKLNILKSAAIVGSRKCSTYGMKVTKIISETLADNNIMVVSGMATGIDYYAHLY
CIENKGFTTAILGSGIDVVYPKQNKKIYDIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSGSLIT
TEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINNNKDNKMALKDSLQAKVYNVLSDEP
KHIDDLLKLMDIDIKHLYEVLFELQLKKEIICLAGNYYVKS
>Mature_361_residues
MVELNLWYANAKVSNNIKTKLLQEFKSVSNIFDYVQNFRYKENINKNIVKVINNFKIAWNKEKIKNMKNKILQDNIKIIN
YMEKEYPSQLRNYEDAPAVLFYKGNIEKLNILKSAAIVGSRKCSTYGMKVTKIISETLADNNIMVVSGMATGIDYYAHLY
CIENKGFTTAILGSGIDVVYPKQNKKIYDIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSGSLIT
TEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINNNKDNKMALKDSLQAKVYNVLSDEP
KHIDDLLKLMDIDIKHLYEVLFELQLKKEIICLAGNYYVKS

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=307, Percent_Identity=33.5504885993485, Blast_Score=184, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40994; Mature: 40994

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELNLWYANAKVSNNIKTKLLQEFKSVSNIFDYVQNFRYKENINKNIVKVINNFKIAWN
CEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEC
KEKIKNMKNKILQDNIKIINYMEKEYPSQLRNYEDAPAVLFYKGNIEKLNILKSAAIVGS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
RKCSTYGMKVTKIISETLADNNIMVVSGMATGIDYYAHLYCIENKGFTTAILGSGIDVVY
CCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHEEEEEEEEEECCCCEEEEECCCCEEEE
PKQNKKIYDIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSGSLIT
CCCCCEEEEEECCCCCEEHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCEEE
TEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINNNKDN
EEEHHHCCCCEEECCCCHHCCCCCCCHHHHHCCCEEEEEHHHHHHHCCCEEEEECCCCCC
KMALKDSLQAKVYNVLSDEPKHIDDLLKLMDIDIKHLYEVLFELQLKKEIICLAGNYYVK
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCEEEC
S
C
>Mature Secondary Structure
MVELNLWYANAKVSNNIKTKLLQEFKSVSNIFDYVQNFRYKENINKNIVKVINNFKIAWN
CEEEEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCEEEEC
KEKIKNMKNKILQDNIKIINYMEKEYPSQLRNYEDAPAVLFYKGNIEKLNILKSAAIVGS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHCC
RKCSTYGMKVTKIISETLADNNIMVVSGMATGIDYYAHLYCIENKGFTTAILGSGIDVVY
CCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHEEEEEEEEEECCCCEEEEECCCCEEEE
PKQNKKIYDIISEDGCIISEFLPGTPPLSYNFPRRNRIISGLSDIVIVVEAGEKSGSLIT
CCCCCEEEEEECCCCCEEHHHCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCEEE
TEIALEQGKDVVAVPGSIFSRESIGTNKIIKEGAYVFTTVEDILNYMGIEKIKINNNKDN
EEEHHHCCCCEEECCCCHHCCCCCCCHHHHHCCCEEEEEHHHHHHHCCCEEEEECCCCCC
KMALKDSLQAKVYNVLSDEPKHIDDLLKLMDIDIKHLYEVLFELQLKKEIICLAGNYYVK
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCEEEC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]