Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

Click here to switch to the map view.

The map label for this gene is 148380338

Identifier: 148380338

GI number: 148380338

Start: 2516191

End: 2517048

Strand: Reverse

Name: 148380338

Synonym: CBO2383

Alternate gene names: NA

Gene position: 2517048-2516191 (Counterclockwise)

Preceding gene: 148380339

Following gene: 148380337

Centisome position: 64.76

GC content: 32.4

Gene sequence:

>858_bases
ATGGAAAATCAATTAGAAATAGTTAAAAATAATCAAGTTACTAGCCTTATAGACAGTGTAGATATAAGCACTATACAAGG
AACTATGCAAAAGATAGCAACCTTTCAGGCTGTTATACAAAAAAATTTAAAAGATGGTCATGACTTTGGAGTGGTTGCAG
GAGCAGGGAGTAAACCAACACTTTTAAAACCAGGTGGAGAAAAAATATGCATGATGTTTGGTCTTAATCCAGAGTATGAG
TTTTTAGAGAGAACAGAGGATTATAAAGATGGATTCTTTGCTTATAACATTAAATGTACTCTATACAGAAACGGTAATCC
GGTAAGCCAAGGTGTGGGGAATTGCAATAGCATGGAAAAGAAATATAGATATATAAATGTTGATGCAGTACCAGATGGAA
TAGATCCTAGTACAGTAGAAAAAGTAACGACTAGGTATGGAACAGTTAAATATAAAATACCAAACCCACATATAGCAGAT
TTAGTAAATACTATTTTAAAGATGGCTAAGAAAAGAGCATTTATAGACGCTGTATTACAAGTTGCAAGCTTAAGTGATGT
ATTTACACAGGACCTAGAGGAAATGCAAGAGTTTTTACAACAAGAGCATGTACAAAATATTGATGAAAATAGTGCTGGGA
ACATTAAAATAAACTTTGGTAAAAACAAAGGTAAAACTTTAGGTCAGATAATGAAAGAAACTCCTGACTATATAGATTGG
CTTATGAAAAATTCAAAAGATCCCGTAATACAAAAAGCTTGCAAGATATTAGTAGATAAAGGATTAAGTAAAAAAGAAGA
TACACCAGAAACAAAAGAAGAGGATTTACCACCATTTTTACAAGACCAGGAGGTATAG

Upstream 100 bases:

>100_bases
TTAAGAAAGATATATTAGCTGCACTGAAAGAAGGAATAGAAATCCCAGGCGCTGTTATAAAACAAACAGAAAGTTTAAGA
ATTAGATAGGAGGAATAAAA

Downstream 100 bases:

>100_bases
TTATGGATAAAAGCGATAAAGAAGCATTAGTGTATCGTTTAAATTGGGTCTTAAAATATGCTGAAGAAGGAAAGATAGAG
AACATAAAAAATGAAGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MENQLEIVKNNQVTSLIDSVDISTIQGTMQKIATFQAVIQKNLKDGHDFGVVAGAGSKPTLLKPGGEKICMMFGLNPEYE
FLERTEDYKDGFFAYNIKCTLYRNGNPVSQGVGNCNSMEKKYRYINVDAVPDGIDPSTVEKVTTRYGTVKYKIPNPHIAD
LVNTILKMAKKRAFIDAVLQVASLSDVFTQDLEEMQEFLQQEHVQNIDENSAGNIKINFGKNKGKTLGQIMKETPDYIDW
LMKNSKDPVIQKACKILVDKGLSKKEDTPETKEEDLPPFLQDQEV

Sequences:

>Translated_285_residues
MENQLEIVKNNQVTSLIDSVDISTIQGTMQKIATFQAVIQKNLKDGHDFGVVAGAGSKPTLLKPGGEKICMMFGLNPEYE
FLERTEDYKDGFFAYNIKCTLYRNGNPVSQGVGNCNSMEKKYRYINVDAVPDGIDPSTVEKVTTRYGTVKYKIPNPHIAD
LVNTILKMAKKRAFIDAVLQVASLSDVFTQDLEEMQEFLQQEHVQNIDENSAGNIKINFGKNKGKTLGQIMKETPDYIDW
LMKNSKDPVIQKACKILVDKGLSKKEDTPETKEEDLPPFLQDQEV
>Mature_285_residues
MENQLEIVKNNQVTSLIDSVDISTIQGTMQKIATFQAVIQKNLKDGHDFGVVAGAGSKPTLLKPGGEKICMMFGLNPEYE
FLERTEDYKDGFFAYNIKCTLYRNGNPVSQGVGNCNSMEKKYRYINVDAVPDGIDPSTVEKVTTRYGTVKYKIPNPHIAD
LVNTILKMAKKRAFIDAVLQVASLSDVFTQDLEEMQEFLQQEHVQNIDENSAGNIKINFGKNKGKTLGQIMKETPDYIDW
LMKNSKDPVIQKACKILVDKGLSKKEDTPETKEEDLPPFLQDQEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32024; Mature: 32024

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQLEIVKNNQVTSLIDSVDISTIQGTMQKIATFQAVIQKNLKDGHDFGVVAGAGSKPT
CCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
LLKPGGEKICMMFGLNPEYEFLERTEDYKDGFFAYNIKCTLYRNGNPVSQGVGNCNSMEK
EECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHCCCCHHHHHH
KYRYINVDAVPDGIDPSTVEKVTTRYGTVKYKIPNPHIADLVNTILKMAKKRAFIDAVLQ
HHEEEEECCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VASLSDVFTQDLEEMQEFLQQEHVQNIDENSAGNIKINFGKNKGKTLGQIMKETPDYIDW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHH
LMKNSKDPVIQKACKILVDKGLSKKEDTPETKEEDLPPFLQDQEV
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MENQLEIVKNNQVTSLIDSVDISTIQGTMQKIATFQAVIQKNLKDGHDFGVVAGAGSKPT
CCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
LLKPGGEKICMMFGLNPEYEFLERTEDYKDGFFAYNIKCTLYRNGNPVSQGVGNCNSMEK
EECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHCCCCHHHHHH
KYRYINVDAVPDGIDPSTVEKVTTRYGTVKYKIPNPHIADLVNTILKMAKKRAFIDAVLQ
HHEEEEECCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
VASLSDVFTQDLEEMQEFLQQEHVQNIDENSAGNIKINFGKNKGKTLGQIMKETPDYIDW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCHHHHHH
LMKNSKDPVIQKACKILVDKGLSKKEDTPETKEEDLPPFLQDQEV
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA