| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380301
Identifier: 148380301
GI number: 148380301
Start: 2494552
End: 2495604
Strand: Reverse
Name: 148380301
Synonym: CBO2350
Alternate gene names: NA
Gene position: 2495604-2494552 (Counterclockwise)
Preceding gene: 148380302
Following gene: 148380300
Centisome position: 64.21
GC content: 30.58
Gene sequence:
>1053_bases ATGCCTAATTTAAGAGATTATATTAATTCAAAAAACATAGCTCTTTATATTAAAGAGTTACCAGCAGAACAAACTATAGA TAAAGCTTTATTTCCGGATAAAAAAGTTAGTGGAACAAAATTAGAAATGGCTAAGGGTGCTAAAAAGAAACCAATAGCAT TAAGAATGAGTACATTTGATGCAGCAACAAAAATGAGAGCATTAAGTGCCGATTTAACTGTTAAATCAACAGAAATACCT TTCTTTAAGGAAGGCATGGGGATTGATGAAACAACCAGAAGAGATTTACAAAACGCAATAGGAGCAAATAATGAAAATTT TGTAAGTGCACTATTAGGACAAGTATTTGAGAATTATTCCAATTTGATAGATGGAGCAAATATAATTTCAAAGAAAATGA GATCATCAGTGATTCAAAATGGGTTATTAAACTTTACTTCAAAAGATGGTGATATTGTAGTAGATTATGGAGTACCATCT AATCATAGAGAGATACTAACAGGTACAGATAAGTGGACAAATCCTGATGCTGATATTATAGGAGATACAAAAGCATGGCA AAAGTCTATTACAAATGACCAATATGCAAAACCTAAAACATTGTTATTAACTGAAAATACTTTTGATAGTACATTTTTAG TTAATAAAGCTATTACTAATCATATTAAGAATAGTAATTTAAATACTTCATTAATTTTATCCCAAGCAAATTATATTCAA TTTGTAAAAGAGGTGCTTCAGTTAACAGTTGTATTTTTAGAAGATGTTACTTATATTCCATATGAGGGTGCTGATCCAGT TCCATACTATGCAGATGGTAAAGTAACACTCATGAGTGGAAATATATTAGGTAACACAGTTTATGGTACAACTCCAGAAG AATTTGATAAACAATCAGGTTCATCTAAACTGGATACTTATATGGTTGACAAAGGAATTGCAGTAACAACTATGGTCAAA GAAGACCCAGTCACAGTAGATACTAAGGTAAGTGTAATGCCCATAGTAAGTTTTGACAGAGCAGATGAAGTATTCTTTGC AACAGTATATTAA
Upstream 100 bases:
>100_bases TATGAATCAGCAGTTAAATTTAATGAAGATGAAGCTATTAAAAAAGCTGAAATGGCAGCATTAAAACAAATAATTTTTGG AGAATAGGGAGGAAACATGT
Downstream 100 bases:
>100_bases GTAGAGTAGTCAACATGGCTACTCTTTAGTTTTATATAAAGAAAGGAGATTTTTATTATGGCAAAGTCTAAGGAAGAACC TAAAAAAGAGACCACAGAAA
Product: phage capsid protein
Products: NA
Alternate protein names: Phage Capsid Protein; Phage Head Protein; Phage-Like Protein; Prophage Head Protein
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPNLRDYINSKNIALYIKELPAEQTIDKALFPDKKVSGTKLEMAKGAKKKPIALRMSTFDAATKMRALSADLTVKSTEIP FFKEGMGIDETTRRDLQNAIGANNENFVSALLGQVFENYSNLIDGANIISKKMRSSVIQNGLLNFTSKDGDIVVDYGVPS NHREILTGTDKWTNPDADIIGDTKAWQKSITNDQYAKPKTLLLTENTFDSTFLVNKAITNHIKNSNLNTSLILSQANYIQ FVKEVLQLTVVFLEDVTYIPYEGADPVPYYADGKVTLMSGNILGNTVYGTTPEEFDKQSGSSKLDTYMVDKGIAVTTMVK EDPVTVDTKVSVMPIVSFDRADEVFFATVY
Sequences:
>Translated_350_residues MPNLRDYINSKNIALYIKELPAEQTIDKALFPDKKVSGTKLEMAKGAKKKPIALRMSTFDAATKMRALSADLTVKSTEIP FFKEGMGIDETTRRDLQNAIGANNENFVSALLGQVFENYSNLIDGANIISKKMRSSVIQNGLLNFTSKDGDIVVDYGVPS NHREILTGTDKWTNPDADIIGDTKAWQKSITNDQYAKPKTLLLTENTFDSTFLVNKAITNHIKNSNLNTSLILSQANYIQ FVKEVLQLTVVFLEDVTYIPYEGADPVPYYADGKVTLMSGNILGNTVYGTTPEEFDKQSGSSKLDTYMVDKGIAVTTMVK EDPVTVDTKVSVMPIVSFDRADEVFFATVY >Mature_349_residues PNLRDYINSKNIALYIKELPAEQTIDKALFPDKKVSGTKLEMAKGAKKKPIALRMSTFDAATKMRALSADLTVKSTEIPF FKEGMGIDETTRRDLQNAIGANNENFVSALLGQVFENYSNLIDGANIISKKMRSSVIQNGLLNFTSKDGDIVVDYGVPSN HREILTGTDKWTNPDADIIGDTKAWQKSITNDQYAKPKTLLLTENTFDSTFLVNKAITNHIKNSNLNTSLILSQANYIQF VKEVLQLTVVFLEDVTYIPYEGADPVPYYADGKVTLMSGNILGNTVYGTTPEEFDKQSGSSKLDTYMVDKGIAVTTMVKE DPVTVDTKVSVMPIVSFDRADEVFFATVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38785; Mature: 38653
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLRDYINSKNIALYIKELPAEQTIDKALFPDKKVSGTKLEMAKGAKKKPIALRMSTFD CCCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEHHHCCCCCCCEEEEEEHHH AATKMRALSADLTVKSTEIPFFKEGMGIDETTRRDLQNAIGANNENFVSALLGQVFENYS HHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH NLIDGANIISKKMRSSVIQNGLLNFTSKDGDIVVDYGVPSNHREILTGTDKWTNPDADII HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCC GDTKAWQKSITNDQYAKPKTLLLTENTFDSTFLVNKAITNHIKNSNLNTSLILSQANYIQ CCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH FVKEVLQLTVVFLEDVTYIPYEGADPVPYYADGKVTLMSGNILGNTVYGTTPEEFDKQSG HHHHHHHHHHHHHHCCEECCCCCCCCCCEEECCEEEEEECCEECCCCCCCCHHHHHHCCC SSKLDTYMVDKGIAVTTMVKEDPVTVDTKVSVMPIVSFDRADEVFFATVY CCCCHHEEECCCCEEEEEECCCCCEECCEEEEEEEEECCCCCCEEEEEEC >Mature Secondary Structure PNLRDYINSKNIALYIKELPAEQTIDKALFPDKKVSGTKLEMAKGAKKKPIALRMSTFD CCHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEHHHCCCCCCCEEEEEEHHH AATKMRALSADLTVKSTEIPFFKEGMGIDETTRRDLQNAIGANNENFVSALLGQVFENYS HHHHHHHHHCCCEEEECCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH NLIDGANIISKKMRSSVIQNGLLNFTSKDGDIVVDYGVPSNHREILTGTDKWTNPDADII HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCC GDTKAWQKSITNDQYAKPKTLLLTENTFDSTFLVNKAITNHIKNSNLNTSLILSQANYIQ CCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH FVKEVLQLTVVFLEDVTYIPYEGADPVPYYADGKVTLMSGNILGNTVYGTTPEEFDKQSG HHHHHHHHHHHHHHCCEECCCCCCCCCCEEECCEEEEEECCEECCCCCCCCHHHHHHCCC SSKLDTYMVDKGIAVTTMVKEDPVTVDTKVSVMPIVSFDRADEVFFATVY CCCCHHEEECCCCEEEEEECCCCCEECCEEEEEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA