| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is xkdM [H]
Identifier: 148380292
GI number: 148380292
Start: 2490053
End: 2490463
Strand: Reverse
Name: xkdM [H]
Synonym: CBO2341
Alternate gene names: 148380292
Gene position: 2490463-2490053 (Counterclockwise)
Preceding gene: 148380293
Following gene: 148380291
Centisome position: 64.07
GC content: 34.31
Gene sequence:
>411_bases ATGGCATTAGATGCAAGTAGAACCATACACGGTTCTAAAGGTAAAATTTTAGTTGATGGAGAATGGCAGACAAACCTCAC AGAATGTACTGCAGAGGTTGAGCTTGATAAAAAGGAGCTTAATCTTTTGGGGGATGACTGGACTAGATATAAACAAGGTT CTAAAAAAGGTACAGGTTCAATAAGTGGATATAAAGTATCTTCAAAAATGATACAGCAGGGATTTAAAAGATTTGAAACT ATTTCATCTCTAGAAGATCCTGAAGCATATGGGTTTGAAAGAATAAGACTTATGAATTGCATGGCTGATAAGTTAAACCT TATAAATTTGAAAGCAAATGAACTCGTAGAGGAGGAAACTCCTTTTACTTACGAGGGATATGAACTTTTAGACCCAATAG TTATAGAATAA
Upstream 100 bases:
>100_bases GGCGAAAAATGATGAAGTATTCTGGAAATGGGATGCCAAGTATGTAAATGTAATGAAACGTATCTATGGAACAGGATATT TAAGATAGGAGTGATAGTAT
Downstream 100 bases:
>100_bases ATAAATTTTAGGAGGAATTATTAATGAGTAATGAAAAAATAAAAGATGAAGAAATATTAAATATGACAGAGGAGGATATA ATAAATAGGCTTATGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MALDASRTIHGSKGKILVDGEWQTNLTECTAEVELDKKELNLLGDDWTRYKQGSKKGTGSISGYKVSSKMIQQGFKRFET ISSLEDPEAYGFERIRLMNCMADKLNLINLKANELVEEETPFTYEGYELLDPIVIE
Sequences:
>Translated_136_residues MALDASRTIHGSKGKILVDGEWQTNLTECTAEVELDKKELNLLGDDWTRYKQGSKKGTGSISGYKVSSKMIQQGFKRFET ISSLEDPEAYGFERIRLMNCMADKLNLINLKANELVEEETPFTYEGYELLDPIVIE >Mature_135_residues ALDASRTIHGSKGKILVDGEWQTNLTECTAEVELDKKELNLLGDDWTRYKQGSKKGTGSISGYKVSSKMIQQGFKRFETI SSLEDPEAYGFERIRLMNCMADKLNLINLKANELVEEETPFTYEGYELLDPIVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqbM [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018989 [H]
Pfam domain/function: PF09393 DUF2001 [H]
EC number: NA
Molecular weight: Translated: 15417; Mature: 15285
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDASRTIHGSKGKILVDGEWQTNLTECTAEVELDKKELNLLGDDWTRYKQGSKKGTGS CCCCCCCCEECCCCEEEECCCCCCCHHHHHHHEEECHHHHHCCCCCHHHHHCCCCCCCCC ISGYKVSSKMIQQGFKRFETISSLEDPEAYGFERIRLMNCMADKLNLINLKANELVEEET CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEECCHHHHHHCCC PFTYEGYELLDPIVIE CCEECCHHHCCCEECC >Mature Secondary Structure ALDASRTIHGSKGKILVDGEWQTNLTECTAEVELDKKELNLLGDDWTRYKQGSKKGTGS CCCCCCCEECCCCEEEECCCCCCCHHHHHHHEEECHHHHHCCCCCHHHHHCCCCCCCCC ISGYKVSSKMIQQGFKRFETISSLEDPEAYGFERIRLMNCMADKLNLINLKANELVEEET CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEECCHHHHHHCCC PFTYEGYELLDPIVIE CCEECCHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]