| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380262
Identifier: 148380262
GI number: 148380262
Start: 2466822
End: 2467154
Strand: Reverse
Name: 148380262
Synonym: CBO2313
Alternate gene names: NA
Gene position: 2467154-2466822 (Counterclockwise)
Preceding gene: 148380263
Following gene: 148380261
Centisome position: 63.47
GC content: 21.02
Gene sequence:
>333_bases ATGAGTAAAAGCAAGAAAATATTTTTAGTGAGTATTCTTTCTATACTAATTGTAAGTTGTGCTTTAACTAATCCTAATAA AAATGAATATGTCAACTGGCACAAAGAAAAAATTCAATCTCAAAGTTCAAATATATTAGAAAAAGGATTAGTAGGCCTTT TAGGAGATAAAATTATATCAAATACAACTACAACAAAAAATTATATTATTTTTAGTATATATAAAACAGAAATAGAAAAT GAAAAATTAACTGCATTAGGAATATTTAAAAATTTTATATTAATAAATAAAGAAAAAGCTGAAAATAAAATCATTAGTAA AGGAGCCAATTAA
Upstream 100 bases:
>100_bases TATTACAAAATTGCCACCACCAATAGAATAAATATCATGAATAAATATCCAATATTATGCTAACAATTATAGATAATATT TATTGTAAGGGGATAGACAA
Downstream 100 bases:
>100_bases GGCTCCTTAGTTGTTAATTGGATTAATTTATTTTTTATTTTATTAAATGTATGTCTAGTTATGTAAGAATTACACTTTTC CCAAGAATAGTATGTACGTT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSKSKKIFLVSILSILIVSCALTNPNKNEYVNWHKEKIQSQSSNILEKGLVGLLGDKIISNTTTTKNYIIFSIYKTEIEN EKLTALGIFKNFILINKEKAENKIISKGAN
Sequences:
>Translated_110_residues MSKSKKIFLVSILSILIVSCALTNPNKNEYVNWHKEKIQSQSSNILEKGLVGLLGDKIISNTTTTKNYIIFSIYKTEIEN EKLTALGIFKNFILINKEKAENKIISKGAN >Mature_109_residues SKSKKIFLVSILSILIVSCALTNPNKNEYVNWHKEKIQSQSSNILEKGLVGLLGDKIISNTTTTKNYIIFSIYKTEIENE KLTALGIFKNFILINKEKAENKIISKGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12376; Mature: 12244
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSKKIFLVSILSILIVSCALTNPNKNEYVNWHKEKIQSQSSNILEKGLVGLLGDKIIS CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTTTTKNYIIFSIYKTEIENEKLTALGIFKNFILINKEKAENKIISKGAN CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEECCHHHHHHHCCCCC >Mature Secondary Structure SKSKKIFLVSILSILIVSCALTNPNKNEYVNWHKEKIQSQSSNILEKGLVGLLGDKIIS CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTTTTKNYIIFSIYKTEIENEKLTALGIFKNFILINKEKAENKIISKGAN CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHEEECCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA