Click here to switch to the map view.

The map label for this gene is 148380129

Identifier: 148380129

GI number: 148380129

Start: 2317933

End: 2319645

Strand: Reverse

Name: 148380129

Synonym: CBO2175

Alternate gene names: NA

Gene position: 2319645-2317933 (Counterclockwise)

Preceding gene: 148380130

Following gene: 148380128

Centisome position: 59.68

GC content: 24.11

Gene sequence:

>1713_bases
TTGACTAAAAATAAGAAAAGTTATATAGGATTAACAATTGGACCAATAGTTGAAACTATCGGTAATGCAAAACAAACTGG
TGAATTATGGGCAAGCAGCTATTTGTTTTCTTATATAATGAAAAATATAATAAAAACATTAATAGTTAAGGATAGAGAAG
TTAATAAGGATAGAGAACAAAATGAAAAATTAGAAAATAGATTTATACTTCCATGCATTGATGATATCTTAAATAAATTA
AGTAAAAATGAAATGGAACAAAAATCTATTCAAAAAATAGAAAATAATACTGATAAAGCAGAGCAAGAAGTGGGATTATT
TCATGATAGATTTATTTTTCAATCAGAAAATGGAGAGTTTGATTTAGTTAAAGAATCTATAAATGAAGTTATAGATGGTA
TCGTAACAGGAATAGAAAATCACGATGTTTGTAAAGATAAATCCAGGGAAGAAATTAAATCCGATATAGAAGATTTCTTA
AAAATATATTATTTAGAAATAGATATAGATTTAAATCAAGAAGAAAAAGAGAATAAACTAAGTAGTGAAAATAACATTAT
ATTTAAAGTTAACAGAGCATTAGATGCTTTAGAACTTAGAGAAAAAATTTTAGGTAATAATGGAGTTGAAAATAATTATA
TTTTACAAACTTTGAATAATAAACAATTAAAAGAACAAGATTTTAAAAAACATTTTTTGTCTAAAGATGCTTATGGGGAA
AATGGAAAAGATGGAGATTATCCATCACTTTTTAAAATAGCATTAGATGAAACATATAATAATGAATTCCCTAATGAAGA
TGAGAAAATAAAGGAAGAATTAAAACAAATGGGAGAAAGGAAAAGATTAAAAGCTAATGAATATGTAGCAATAGTTCAAG
CTGATGGTGATTCCATGGGGAGGGTTATAGAAAAATTTAAAATACATAATGATAGAGAGAACATATATGTAGATTATAAA
GATTTTTCAAGTAAATTATTAGAATATGATAAGAATTCTCATGAAAAAATTAAAAAGTATGGTGGATTCACAATATATGC
TGGTGGAGATGATTTACTTTTTATAGCTCCTGTAATAACTAAAAATAAAAACAATATTTTTCAACTTATAGATGCTTTAT
CGGGGTTATTTGATAATGAGTTTAAACATGAAGAAGAAAAACCAACTACATCTTTTGGCATTGCTATAGTACATCACAAA
TTCCCATTGTATTATGCTTTAGATGAAGCACGTGATTTACTTTTTAATAAGGCTAAAAACTATAAATTTAATGGTGAAGA
AAAAAATGCCATAGCTTTTAAAGTGATAAAAAGTAGTGGACAATCTTTTGAAACAGTAGTAGGAAAGAAGAGTGAGTCTT
ATAAGCAATTTAAGGAGCTGTTTAAGAATGTAAGTAATAGTTTAAATGGCAAAGATAGAAAGATTAAAAATTATCTAAAA
GCTATACATTTTAAAATTAAGAGGGATAAAGTTATATTAAATAAGATTGGTAAAAATGAAGAATTACTGGAAAATTATTT
TAAAAATAATTTCGATGAAAAGTTTCATGAAAATGGTGATATAAAAAAATATATAAATTATTTGATAAAATTCATATACC
TAATTTATGGAGAAACAAAAACTGATGAAGATAAGAATAAATGCATAGAGCAAATATATACTTATTTAAGATTTATTAAA
TTTATGGATGAAGATATAAATTTAGATAATTAA

Upstream 100 bases:

>100_bases
TAATAATCATATAAAGGTGTCAAATGTAAATAACGTTTTCGAAAATAAAATAAGAAAAGCAAAACTAAGGAGAATAGATA
TTAAACAGGTGGTGAAGTAA

Downstream 100 bases:

>100_bases
AAAGAAAGGTGAAAAGATGAGCAAATATTTAGTTAAATTAAAGCCAGTAGACTCTTTTTTCTTTGGGGGAGAAAAAGTTT
TTGACTTTTATGATGGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; CRISPR-Associated Csm1 Family Protein; CRISPR-Associated Ramp Crm2 Family Protein

Number of amino acids: Translated: 570; Mature: 569

Protein sequence:

>570_residues
MTKNKKSYIGLTIGPIVETIGNAKQTGELWASSYLFSYIMKNIIKTLIVKDREVNKDREQNEKLENRFILPCIDDILNKL
SKNEMEQKSIQKIENNTDKAEQEVGLFHDRFIFQSENGEFDLVKESINEVIDGIVTGIENHDVCKDKSREEIKSDIEDFL
KIYYLEIDIDLNQEEKENKLSSENNIIFKVNRALDALELREKILGNNGVENNYILQTLNNKQLKEQDFKKHFLSKDAYGE
NGKDGDYPSLFKIALDETYNNEFPNEDEKIKEELKQMGERKRLKANEYVAIVQADGDSMGRVIEKFKIHNDRENIYVDYK
DFSSKLLEYDKNSHEKIKKYGGFTIYAGGDDLLFIAPVITKNKNNIFQLIDALSGLFDNEFKHEEEKPTTSFGIAIVHHK
FPLYYALDEARDLLFNKAKNYKFNGEEKNAIAFKVIKSSGQSFETVVGKKSESYKQFKELFKNVSNSLNGKDRKIKNYLK
AIHFKIKRDKVILNKIGKNEELLENYFKNNFDEKFHENGDIKKYINYLIKFIYLIYGETKTDEDKNKCIEQIYTYLRFIK
FMDEDINLDN

Sequences:

>Translated_570_residues
MTKNKKSYIGLTIGPIVETIGNAKQTGELWASSYLFSYIMKNIIKTLIVKDREVNKDREQNEKLENRFILPCIDDILNKL
SKNEMEQKSIQKIENNTDKAEQEVGLFHDRFIFQSENGEFDLVKESINEVIDGIVTGIENHDVCKDKSREEIKSDIEDFL
KIYYLEIDIDLNQEEKENKLSSENNIIFKVNRALDALELREKILGNNGVENNYILQTLNNKQLKEQDFKKHFLSKDAYGE
NGKDGDYPSLFKIALDETYNNEFPNEDEKIKEELKQMGERKRLKANEYVAIVQADGDSMGRVIEKFKIHNDRENIYVDYK
DFSSKLLEYDKNSHEKIKKYGGFTIYAGGDDLLFIAPVITKNKNNIFQLIDALSGLFDNEFKHEEEKPTTSFGIAIVHHK
FPLYYALDEARDLLFNKAKNYKFNGEEKNAIAFKVIKSSGQSFETVVGKKSESYKQFKELFKNVSNSLNGKDRKIKNYLK
AIHFKIKRDKVILNKIGKNEELLENYFKNNFDEKFHENGDIKKYINYLIKFIYLIYGETKTDEDKNKCIEQIYTYLRFIK
FMDEDINLDN
>Mature_569_residues
TKNKKSYIGLTIGPIVETIGNAKQTGELWASSYLFSYIMKNIIKTLIVKDREVNKDREQNEKLENRFILPCIDDILNKLS
KNEMEQKSIQKIENNTDKAEQEVGLFHDRFIFQSENGEFDLVKESINEVIDGIVTGIENHDVCKDKSREEIKSDIEDFLK
IYYLEIDIDLNQEEKENKLSSENNIIFKVNRALDALELREKILGNNGVENNYILQTLNNKQLKEQDFKKHFLSKDAYGEN
GKDGDYPSLFKIALDETYNNEFPNEDEKIKEELKQMGERKRLKANEYVAIVQADGDSMGRVIEKFKIHNDRENIYVDYKD
FSSKLLEYDKNSHEKIKKYGGFTIYAGGDDLLFIAPVITKNKNNIFQLIDALSGLFDNEFKHEEEKPTTSFGIAIVHHKF
PLYYALDEARDLLFNKAKNYKFNGEEKNAIAFKVIKSSGQSFETVVGKKSESYKQFKELFKNVSNSLNGKDRKIKNYLKA
IHFKIKRDKVILNKIGKNEELLENYFKNNFDEKFHENGDIKKYINYLIKFIYLIYGETKTDEDKNKCIEQIYTYLRFIKF
MDEDINLDN

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66763; Mature: 66632

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNKKSYIGLTIGPIVETIGNAKQTGELWASSYLFSYIMKNIIKTLIVKDREVNKDREQ
CCCCCCCEECEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
NEKLENRFILPCIDDILNKLSKNEMEQKSIQKIENNTDKAEQEVGLFHDRFIFQSENGEF
HHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCH
DLVKESINEVIDGIVTGIENHDVCKDKSREEIKSDIEDFLKIYYLEIDIDLNQEEKENKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHC
SSENNIIFKVNRALDALELREKILGNNGVENNYILQTLNNKQLKEQDFKKHFLSKDAYGE
CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC
NGKDGDYPSLFKIALDETYNNEFPNEDEKIKEELKQMGERKRLKANEYVAIVQADGDSMG
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHH
RVIEKFKIHNDRENIYVDYKDFSSKLLEYDKNSHEKIKKYGGFTIYAGGDDLLFIAPVIT
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCEEEEEEEHC
KNKNNIFQLIDALSGLFDNEFKHEEEKPTTSFGIAIVHHKFPLYYALDEARDLLFNKAKN
CCCCHHHHHHHHHHHHHCCHHCCCCCCCCCHHCEEEEEECCCCEEEHHHHHHHHHHHCCC
YKFNGEEKNAIAFKVIKSSGQSFETVVGKKSESYKQFKELFKNVSNSLNGKDRKIKNYLK
CCCCCCCCCHHEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AIHFKIKRDKVILNKIGKNEELLENYFKNNFDEKFHENGDIKKYINYLIKFIYLIYGETK
HHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
TDEDKNKCIEQIYTYLRFIKFMDEDINLDN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKNKKSYIGLTIGPIVETIGNAKQTGELWASSYLFSYIMKNIIKTLIVKDREVNKDREQ
CCCCCCEECEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
NEKLENRFILPCIDDILNKLSKNEMEQKSIQKIENNTDKAEQEVGLFHDRFIFQSENGEF
HHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCH
DLVKESINEVIDGIVTGIENHDVCKDKSREEIKSDIEDFLKIYYLEIDIDLNQEEKENKL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHC
SSENNIIFKVNRALDALELREKILGNNGVENNYILQTLNNKQLKEQDFKKHFLSKDAYGE
CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC
NGKDGDYPSLFKIALDETYNNEFPNEDEKIKEELKQMGERKRLKANEYVAIVQADGDSMG
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHH
RVIEKFKIHNDRENIYVDYKDFSSKLLEYDKNSHEKIKKYGGFTIYAGGDDLLFIAPVIT
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCEEEEEEEHC
KNKNNIFQLIDALSGLFDNEFKHEEEKPTTSFGIAIVHHKFPLYYALDEARDLLFNKAKN
CCCCHHHHHHHHHHHHHCCHHCCCCCCCCCHHCEEEEEECCCCEEEHHHHHHHHHHHCCC
YKFNGEEKNAIAFKVIKSSGQSFETVVGKKSESYKQFKELFKNVSNSLNGKDRKIKNYLK
CCCCCCCCCHHEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AIHFKIKRDKVILNKIGKNEELLENYFKNNFDEKFHENGDIKKYINYLIKFIYLIYGETK
HHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
TDEDKNKCIEQIYTYLRFIKFMDEDINLDN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA