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The map label for this gene is yhcS [H]

Identifier: 148380089

GI number: 148380089

Start: 2270880

End: 2271494

Strand: Reverse

Name: yhcS [H]

Synonym: CBO2133

Alternate gene names: 148380089

Gene position: 2271494-2270880 (Counterclockwise)

Preceding gene: 148380090

Following gene: 148380088

Centisome position: 58.44

GC content: 32.68

Gene sequence:

>615_bases
ATGAGTAAATTTAAGTTATCATTTAAAAAGTTATCATTAGTAAAAATCTTAAGTCTAGGAACTATAGTACTAGGCTTAGG
ATGTATTTCTTGGTCATTAATTAATATATGGTCACAGCCAAAGAATTCTTACAATGAAGCCACTGATAATGTAGAATATT
TATCTGAATTAGACTCTTACGATAAAAGTACAGTTATTTATGATGTGAATCCTGAAAAGGGAGATAACTTTGGAAGTCTT
ATAATGCCAACTCTAAAGCAAAAGTTTCCCATTATACAGGGAACTGATGATAAGGAGTTGAAAAAAGGTGTAGGCCACTT
TCTTGAAAGTGCACTACCTGGCGAAGAAGATAACTGTGTGCTTTCAGGACATCGAGATACTGTATTTAGTCAAATAGGTA
AACTCAAAATAGGAGATCCATTGATTGTGCAAACGTCAGCTGGAATATTTACTTATAGGGTGAGTGAAACTCGAATAGTT
AAGAAAGATGATAAAACGGTAATTGTGCCTTCAGATAATGCGAAACTTACTATGACCACTTGTTATCCATTTTATTTTAT
TGGATATGCTCCAGAGCGTTATATAGTTTTCGCAAACTTAGTGAAGAATAAATAA

Upstream 100 bases:

>100_bases
CTTCCAAATACTGCTACACATGCATACGGAATATTACTAGCAGGTTCTGTATTAGCACTACTAGGTGCATGTGGATTTGT
ATTTAAAAAGCGTCATAAAC

Downstream 100 bases:

>100_bases
AACAGCATCTTAGGATGCTGTTTTTTCTTATGGATAAGTTTAGAAGAATTTATAGTGAACCGGTGGAGCTGAGCTAGGTT
ATGTAATTTAAATGGTGGAA

Product: sortase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSKFKLSFKKLSLVKILSLGTIVLGLGCISWSLINIWSQPKNSYNEATDNVEYLSELDSYDKSTVIYDVNPEKGDNFGSL
IMPTLKQKFPIIQGTDDKELKKGVGHFLESALPGEEDNCVLSGHRDTVFSQIGKLKIGDPLIVQTSAGIFTYRVSETRIV
KKDDKTVIVPSDNAKLTMTTCYPFYFIGYAPERYIVFANLVKNK

Sequences:

>Translated_204_residues
MSKFKLSFKKLSLVKILSLGTIVLGLGCISWSLINIWSQPKNSYNEATDNVEYLSELDSYDKSTVIYDVNPEKGDNFGSL
IMPTLKQKFPIIQGTDDKELKKGVGHFLESALPGEEDNCVLSGHRDTVFSQIGKLKIGDPLIVQTSAGIFTYRVSETRIV
KKDDKTVIVPSDNAKLTMTTCYPFYFIGYAPERYIVFANLVKNK
>Mature_203_residues
SKFKLSFKKLSLVKILSLGTIVLGLGCISWSLINIWSQPKNSYNEATDNVEYLSELDSYDKSTVIYDVNPEKGDNFGSLI
MPTLKQKFPIIQGTDDKELKKGVGHFLESALPGEEDNCVLSGHRDTVFSQIGKLKIGDPLIVQTSAGIFTYRVSETRIVK
KDDKTVIVPSDNAKLTMTTCYPFYFIGYAPERYIVFANLVKNK

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 22849; Mature: 22717

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFKLSFKKLSLVKILSLGTIVLGLGCISWSLINIWSQPKNSYNEATDNVEYLSELDSY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
DKSTVIYDVNPEKGDNFGSLIMPTLKQKFPIIQGTDDKELKKGVGHFLESALPGEEDNCV
CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEE
LSGHRDTVFSQIGKLKIGDPLIVQTSAGIFTYRVSETRIVKKDDKTVIVPSDNAKLTMTT
EECCCHHHHHHHCCEECCCCEEEEECCCEEEEEECCEEEEECCCCEEEEECCCCEEEEEE
CYPFYFIGYAPERYIVFANLVKNK
ECEEEEEEECCCEEEEEEEECCCC
>Mature Secondary Structure 
SKFKLSFKKLSLVKILSLGTIVLGLGCISWSLINIWSQPKNSYNEATDNVEYLSELDSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
DKSTVIYDVNPEKGDNFGSLIMPTLKQKFPIIQGTDDKELKKGVGHFLESALPGEEDNCV
CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHCCCCCCCEE
LSGHRDTVFSQIGKLKIGDPLIVQTSAGIFTYRVSETRIVKKDDKTVIVPSDNAKLTMTT
EECCCHHHHHHHCCEECCCCEEEEECCCEEEEEECCEEEEECCCCEEEEECCCCEEEEEE
CYPFYFIGYAPERYIVFANLVKNK
ECEEEEEEECCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]