Click here to switch to the map view.

The map label for this gene is 148380021

Identifier: 148380021

GI number: 148380021

Start: 2203288

End: 2203929

Strand: Reverse

Name: 148380021

Synonym: CBO2064

Alternate gene names: NA

Gene position: 2203929-2203288 (Counterclockwise)

Preceding gene: 148380022

Following gene: 148380020

Centisome position: 56.7

GC content: 30.06

Gene sequence:

>642_bases
ATGTTAATTAGCCTTGTGAAAAAAGATATTTTACTTGTAAAAAAATACATGTTGGTTATGATGATTATAACTATCGCTAT
TCCAATATTTATTATGTGGCGTACTCCTGAATTTTTAGGTTTTGGTGCATTTTTAATTTCTACTATTTTTGCTGAGTTTA
TGCTGTATCAATATGTTTCAATGACAGAACTTAAATATCCAAAAGCGGATGCCTTATTGTGTGCAACTCCATATTCTCGC
CGTTCAATTGTAGCTGCGAGATATATATTTTTATTGCTGATTTTCGTATATTGTGTTTTAGCATATAGTATTGTATCGCT
TATATTACCTCAAGTTAAGTTGCTTAGCTTATCTAATGTATTAGCGGTAATGCTAATTTCAGCAATACTATTTGGCGTGT
ATACACCTATTCAATATAAATTAGGCTACGAAAAGACAAAGTACTTTTTTTCTATTGTGATTGTTGCAACACCATTTATG
TTACCAACATTAACGAAACTATGGATTTCACTGGATTTGAGTTGGTTATCTTCCATGCCGTCGTTCGTTTGGATTTTAAT
AATGATAGCTATTATTATTTTAGTTTTAAGTGTTTCTGTGATTACATCGATAAAGGTTTATGAAAAAAAGGAACTCTATT
AA

Upstream 100 bases:

>100_bases
AACAATTAGATTTAGTCCAAAAGAGTATGCGCAATATTTTAGTTGAAAGACCGAGTATAGAGGATATTATGCTGGGATAT
ATTAAGGGAGGTAAAAGCAA

Downstream 100 bases:

>100_bases
TAAATGATTAAATTTTTAGAAAGGGAGTATACTATGCCTACACTTCCACAACCCATAGTGATTTTACTTGTTCTTTTTCC
TATTATATATTTGTCTTATA

Product: ABC transporter permease component

Products: NA

Alternate protein names: ABC Transporter Permease

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLISLVKKDILLVKKYMLVMMIITIAIPIFIMWRTPEFLGFGAFLISTIFAEFMLYQYVSMTELKYPKADALLCATPYSR
RSIVAARYIFLLLIFVYCVLAYSIVSLILPQVKLLSLSNVLAVMLISAILFGVYTPIQYKLGYEKTKYFFSIVIVATPFM
LPTLTKLWISLDLSWLSSMPSFVWILIMIAIIILVLSVSVITSIKVYEKKELY

Sequences:

>Translated_213_residues
MLISLVKKDILLVKKYMLVMMIITIAIPIFIMWRTPEFLGFGAFLISTIFAEFMLYQYVSMTELKYPKADALLCATPYSR
RSIVAARYIFLLLIFVYCVLAYSIVSLILPQVKLLSLSNVLAVMLISAILFGVYTPIQYKLGYEKTKYFFSIVIVATPFM
LPTLTKLWISLDLSWLSSMPSFVWILIMIAIIILVLSVSVITSIKVYEKKELY
>Mature_213_residues
MLISLVKKDILLVKKYMLVMMIITIAIPIFIMWRTPEFLGFGAFLISTIFAEFMLYQYVSMTELKYPKADALLCATPYSR
RSIVAARYIFLLLIFVYCVLAYSIVSLILPQVKLLSLSNVLAVMLISAILFGVYTPIQYKLGYEKTKYFFSIVIVATPFM
LPTLTKLWISLDLSWLSSMPSFVWILIMIAIIILVLSVSVITSIKVYEKKELY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24454; Mature: 24454

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISLVKKDILLVKKYMLVMMIITIAIPIFIMWRTPEFLGFGAFLISTIFAEFMLYQYVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MTELKYPKADALLCATPYSRRSIVAARYIFLLLIFVYCVLAYSIVSLILPQVKLLSLSNV
HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVMLISAILFGVYTPIQYKLGYEKTKYFFSIVIVATPFMLPTLTKLWISLDLSWLSSMP
HHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SFVWILIMIAIIILVLSVSVITSIKVYEKKELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLISLVKKDILLVKKYMLVMMIITIAIPIFIMWRTPEFLGFGAFLISTIFAEFMLYQYVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MTELKYPKADALLCATPYSRRSIVAARYIFLLLIFVYCVLAYSIVSLILPQVKLLSLSNV
HHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVMLISAILFGVYTPIQYKLGYEKTKYFFSIVIVATPFMLPTLTKLWISLDLSWLSSMP
HHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SFVWILIMIAIIILVLSVSVITSIKVYEKKELY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA