| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380011
Identifier: 148380011
GI number: 148380011
Start: 2194355
End: 2195254
Strand: Reverse
Name: 148380011
Synonym: CBO2054
Alternate gene names: NA
Gene position: 2195254-2194355 (Counterclockwise)
Preceding gene: 148380017
Following gene: 148380010
Centisome position: 56.48
GC content: 34.89
Gene sequence:
>900_bases ATGGTTCCTCCACTTATAAGTTATGTTACATTTAATCGTTTAGGATTAACGGTCAAAAACTTATCATCTATACTTGATTC CACAGATGATTTTGAATTACACATAATAGATAACAATTCAACTGATGGCACCTGGAAATATATCCAAAGCTTGAATGACC GCCGTATTAAGTCCAGGATACAGATTGGAGTAAACTCCGGGCCAATTTATGCATTAAACCTGAATCTCTCCAAAAGAAAA CCTGATCAGTACTTTATTACAGTAGATAACGACGTATATATTGAAACAAAGGATTGGATAACCCGCTTTATGAAAGTGTT TGAAACATTTCCTGAAGTAGGCCTTCTTGGCGTACAAAGAGGCCAGCCGTATCCGGAAGAACTGCCTCCTATTGTCCTCA AAATACAGAATGGCGTCTATTATCTTGAATTGGATAACACTTATACTGACACAATGCGAAACTATATACCCGGATGTTGT ATGTGCCTAAGACCTGAACTTATTAAACAAATCGGCTATTGGTGTGAGGAAAATTGCTTTGGTGATATTGAGCTTTCAAA CAGAATAAATAATTACACTGATTTCAAGACCGGTTTTGTGACCAACATTAATATAAAAATGCCACAGATAATTGATTGTG CGGCATGTCAATATAAAGACCAGTGTACTCTTGATAAATACTGCGAAACATGCTTTACAGAGTACCAAAACTTATATAAA ATTTATGATTTCAAGAAAAAATTCAAATGGAAATTTGATGAAACAATAAAGGATATGAAAAGCGGTGCGCGTCCAGTGTA CTGTGCTTCAGTACTTGATGCTAATTCAACATGGAATCATATATTCAATAAAGAGTGGGCGTTGGAGAATTTCAAATTTT TTAATGATAATGCAAATTGA
Upstream 100 bases:
>100_bases ATTCAGAATTTGGATTTAAGTAATGCATCAATCTAAAAAAATAAGCATAATATGAAATTGTAGAGTATACAAATATTTTT AATGAAAGGAGTGAGAGTTT
Downstream 100 bases:
>100_bases TTAATAAAGTAGGAAAATTTTATACCGATTCAAGGAGGTGCAAATATGACAGCAGAACGTTTTACAAAGCCTTTCTATAT AACACAACCTTTGCTGCCTG
Product: glycosyl transferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MVPPLISYVTFNRLGLTVKNLSSILDSTDDFELHIIDNNSTDGTWKYIQSLNDRRIKSRIQIGVNSGPIYALNLNLSKRK PDQYFITVDNDVYIETKDWITRFMKVFETFPEVGLLGVQRGQPYPEELPPIVLKIQNGVYYLELDNTYTDTMRNYIPGCC MCLRPELIKQIGYWCEENCFGDIELSNRINNYTDFKTGFVTNINIKMPQIIDCAACQYKDQCTLDKYCETCFTEYQNLYK IYDFKKKFKWKFDETIKDMKSGARPVYCASVLDANSTWNHIFNKEWALENFKFFNDNAN
Sequences:
>Translated_299_residues MVPPLISYVTFNRLGLTVKNLSSILDSTDDFELHIIDNNSTDGTWKYIQSLNDRRIKSRIQIGVNSGPIYALNLNLSKRK PDQYFITVDNDVYIETKDWITRFMKVFETFPEVGLLGVQRGQPYPEELPPIVLKIQNGVYYLELDNTYTDTMRNYIPGCC MCLRPELIKQIGYWCEENCFGDIELSNRINNYTDFKTGFVTNINIKMPQIIDCAACQYKDQCTLDKYCETCFTEYQNLYK IYDFKKKFKWKFDETIKDMKSGARPVYCASVLDANSTWNHIFNKEWALENFKFFNDNAN >Mature_299_residues MVPPLISYVTFNRLGLTVKNLSSILDSTDDFELHIIDNNSTDGTWKYIQSLNDRRIKSRIQIGVNSGPIYALNLNLSKRK PDQYFITVDNDVYIETKDWITRFMKVFETFPEVGLLGVQRGQPYPEELPPIVLKIQNGVYYLELDNTYTDTMRNYIPGCC MCLRPELIKQIGYWCEENCFGDIELSNRINNYTDFKTGFVTNINIKMPQIIDCAACQYKDQCTLDKYCETCFTEYQNLYK IYDFKKKFKWKFDETIKDMKSGARPVYCASVLDANSTWNHIFNKEWALENFKFFNDNAN
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35070; Mature: 35070
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPPLISYVTFNRLGLTVKNLSSILDSTDDFELHIIDNNSTDGTWKYIQSLNDRRIKSRI CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHE QIGVNSGPIYALNLNLSKRKPDQYFITVDNDVYIETKDWITRFMKVFETFPEVGLLGVQR EEECCCCCEEEEEECCCCCCCCEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEECCC GQPYPEELPPIVLKIQNGVYYLELDNTYTDTMRNYIPGCCMCLRPELIKQIGYWCEENCF CCCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHCCHHHHHCCHHHHHHHCCHHHCCCC GDIELSNRINNYTDFKTGFVTNINIKMPQIIDCAACQYKDQCTLDKYCETCFTEYQNLYK CCEEHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IYDFKKKFKWKFDETIKDMKSGARPVYCASVLDANSTWNHIFNKEWALENFKFFNDNAN HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCHHHCCCEEECCCCC >Mature Secondary Structure MVPPLISYVTFNRLGLTVKNLSSILDSTDDFELHIIDNNSTDGTWKYIQSLNDRRIKSRI CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHE QIGVNSGPIYALNLNLSKRKPDQYFITVDNDVYIETKDWITRFMKVFETFPEVGLLGVQR EEECCCCCEEEEEECCCCCCCCEEEEEECCEEEEECHHHHHHHHHHHHHCCCCCEEECCC GQPYPEELPPIVLKIQNGVYYLELDNTYTDTMRNYIPGCCMCLRPELIKQIGYWCEENCF CCCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHCCHHHHHCCHHHHHHHCCHHHCCCC GDIELSNRINNYTDFKTGFVTNINIKMPQIIDCAACQYKDQCTLDKYCETCFTEYQNLYK CCEEHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IYDFKKKFKWKFDETIKDMKSGARPVYCASVLDANSTWNHIFNKEWALENFKFFNDNAN HHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA