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The map label for this gene is yhaM [C]

Identifier: 148379970

GI number: 148379970

Start: 2145393

End: 2146697

Strand: Reverse

Name: yhaM [C]

Synonym: CBO2008

Alternate gene names: 148379970

Gene position: 2146697-2145393 (Counterclockwise)

Preceding gene: 148379971

Following gene: 148379969

Centisome position: 55.23

GC content: 32.72

Gene sequence:

>1305_bases
ATGTCAAGATTATCAAAAGAGGAAATAAGTGAAAGATTATTAGAGTTAATAAAAGATGAAACTAAGCCAGCTATAGGATG
TACTGAACCTGTTGCAGTAGCTTTTACTGTAGCAACAGGCAAAAAGTATATGGCAGGTGAAGTCTTAAAAATAGACTTAA
AGGTAAGTAAAAACATATTAAAAAATGGTAAATCCGTTACTATACCAAATACAGAGGTTTGTGGTTTAGATATTGCAGGG
GCTCTTGGAGAAATATGTGGAGATCCAGAGGAAGGATTATTTGTTTTTAGAAATGTAAACAATGAATATTTAGATAAAGC
AAAAGAAATGATAAAAAATAAAGTTGTAACTCTTAATCCTATTGAAAATACAGATCCTGTTTTTGTAGAGGCTACTTTAA
AGGGAGAACAGGATGAAGTTATAGCTATTTTAAAGGGAGGACATACTAATATAGAGAAGGTTATTGTAAATGGTAAAATA
GCCTTTGAAAAAGATAATAAAAATAAAAAAGATAATAAAGATTGTGATTTTATTAAGGAGCTTTCTTTAAAGGATATAAG
ACAAATTACAGAGGATATTAGTATAGAAAAATTAGACTTTATAATGGATGGAATAGAGATGAATAAAGAAGCTGCAAAGG
AAGGTTTAAAAAGACAAAAGGGTTTAACCTTAGGATCTTCTCTTTTAAAATTACAAGAGGAAGGAAAAATAGGTAAGGAT
TCTGCAACCATAGCAAGGATTTTAACTGCTGCCGGCTCTGATCTTAGAATGGGTGGAGGAATGTGCCCTATAATGACCAG
TGGTGGAAGTGGTAATCAAGGATTATGTGTAATTTTACCTATTAACGTAGTGGCAGAGGATATAAAAGCTCCTAAGGAAA
GACTTCAAAGGGCAGTATTCTTTGGTCACGCCGTTAATAATTTTGTAAAGAAATATACAGGAAAATTATCTGCAATTTGT
GGTTGTGCCATAGCAGCAGGTATAGGAGCAACAGCAGGAATTGCTTGGCTTTTAGGTGGAAAAGATAAGGAAATAGAAGG
AGCTATATTAAATATGTTAGCAAACCTTACAGGAATGGTATGTGATGGAGCTAAAGGAAGCTGTGCCATTAAACTTTCAA
CCTCAGCCTCTGAAGCGGTTATATCAGCTTATTTAGCTTTAAATGATATAATTGTGCCTAATAATACAGGAATTATAGGA
AATACCGTTGAAGATACAATAAACAATCTTGGAATGCTATGTAAAGACGGATTTTATAAAGCTGATGATGTAATGCTTTC
TATAGCTTGTAAAGAGGTAATATAG

Upstream 100 bases:

>100_bases
AATGTAAGGCTTTATAATGGATTGAGTATAAAATTTAAATTCTTTGGCATCCTTATTGCTACGCATTATAAGTAGTAGAA
CTTAAAGGGAGTGGGTTAGG

Downstream 100 bases:

>100_bases
TATATAAGATTATAAAGTTCAGGTGGAATTTTTTAGAAAATTTATTTTTCCACCTGAACTTTATAAATATCTGGAATAAA
TAAGTTATACAAGGACTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSRLSKEEISERLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAG
ALGEICGDPEEGLFVFRNVNNEYLDKAKEMIKNKVVTLNPIENTDPVFVEATLKGEQDEVIAILKGGHTNIEKVIVNGKI
AFEKDNKNKKDNKDCDFIKELSLKDIRQITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQEEGKIGKD
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPINVVAEDIKAPKERLQRAVFFGHAVNNFVKKYTGKLSAIC
GCAIAAGIGATAGIAWLLGGKDKEIEGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIG
NTVEDTINNLGMLCKDGFYKADDVMLSIACKEVI

Sequences:

>Translated_434_residues
MSRLSKEEISERLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAG
ALGEICGDPEEGLFVFRNVNNEYLDKAKEMIKNKVVTLNPIENTDPVFVEATLKGEQDEVIAILKGGHTNIEKVIVNGKI
AFEKDNKNKKDNKDCDFIKELSLKDIRQITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQEEGKIGKD
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPINVVAEDIKAPKERLQRAVFFGHAVNNFVKKYTGKLSAIC
GCAIAAGIGATAGIAWLLGGKDKEIEGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIG
NTVEDTINNLGMLCKDGFYKADDVMLSIACKEVI
>Mature_433_residues
SRLSKEEISERLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNILKNGKSVTIPNTEVCGLDIAGA
LGEICGDPEEGLFVFRNVNNEYLDKAKEMIKNKVVTLNPIENTDPVFVEATLKGEQDEVIAILKGGHTNIEKVIVNGKIA
FEKDNKNKKDNKDCDFIKELSLKDIRQITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQEEGKIGKDS
ATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPINVVAEDIKAPKERLQRAVFFGHAVNNFVKKYTGKLSAICG
CAIAAGIGATAGIAWLLGGKDKEIEGAILNMLANLTGMVCDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGN
TVEDTINNLGMLCKDGFYKADDVMLSIACKEVI

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=424, Percent_Identity=34.9056603773585, Blast_Score=236, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 46389; Mature: 46257

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLSKEEISERLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNIL
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHH
KNGKSVTIPNTEVCGLDIAGALGEICGDPEEGLFVFRNVNNEYLDKAKEMIKNKVVTLNP
HCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECC
IENTDPVFVEATLKGEQDEVIAILKGGHTNIEKVIVNGKIAFEKDNKNKKDNKDCDFIKE
CCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECEEEEECCCCCCCCCCCHHHHHH
LSLKDIRQITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQEEGKIGKD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPINVVAEDIKAPKERLQRAVF
HHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
FGHAVNNFVKKYTGKLSAICGCAIAAGIGATAGIAWLLGGKDKEIEGAILNMLANLTGMV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHHHHHHHHEE
CDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGNTVEDTINNLGMLCKDGFYK
ECCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
ADDVMLSIACKEVI
HHHHHEEHHHHHCC
>Mature Secondary Structure 
SRLSKEEISERLLELIKDETKPAIGCTEPVAVAFTVATGKKYMAGEVLKIDLKVSKNIL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEHHHHHHHH
KNGKSVTIPNTEVCGLDIAGALGEICGDPEEGLFVFRNVNNEYLDKAKEMIKNKVVTLNP
HCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECC
IENTDPVFVEATLKGEQDEVIAILKGGHTNIEKVIVNGKIAFEKDNKNKKDNKDCDFIKE
CCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEECEEEEECCCCCCCCCCCHHHHHH
LSLKDIRQITEDISIEKLDFIMDGIEMNKEAAKEGLKRQKGLTLGSSLLKLQEEGKIGKD
CCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
SATIARILTAAGSDLRMGGGMCPIMTSGGSGNQGLCVILPINVVAEDIKAPKERLQRAVF
HHHHHHHHHHCCCCEECCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
FGHAVNNFVKKYTGKLSAICGCAIAAGIGATAGIAWLLGGKDKEIEGAILNMLANLTGMV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCCHHHHHHHHHHHHHHEE
CDGAKGSCAIKLSTSASEAVISAYLALNDIIVPNNTGIIGNTVEDTINNLGMLCKDGFYK
ECCCCCCEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC
ADDVMLSIACKEVI
HHHHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA