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The map label for this gene is gerAB2 [H]

Identifier: 148379938

GI number: 148379938

Start: 2110541

End: 2111632

Strand: Direct

Name: gerAB2 [H]

Synonym: CBO1976

Alternate gene names: 148379938

Gene position: 2110541-2111632 (Clockwise)

Preceding gene: 148379937

Following gene: 148379939

Centisome position: 54.3

GC content: 27.01

Gene sequence:

>1092_bases
ATGATGAACAATAAAGAGGATGCCTTAACTGAAAGTCAGTTAACCTTTATGTTTATAGGTAGCCTAATTGGAATAACCCT
ACTAAGTTTACCTTTAGATCCAATAAAAATAGCTAAACAAGACGCTTGGATAGCTGCCTTTTTAGGAATGATTTATCCAA
CATATGTTGTATTTATAGCAATTTATATAAGAAAAAAATACCCTAAAAAAAATATTCTAGATTTGAGCAAAAAAATTTAT
GGAAAGATCTTGGGAAACATATTAAATTTAATATTTATATCATTTTTTTTTCTCATTGCTACAGATGTAGCCGCAGGTAT
AAATAATGTTCTAAGAAATTACATGGTTAGCTTTTTAAATTCCTGGAATATATTATCTCTATTGTTTTTGGGAGCTGCTT
ATACTGTTTATGGAGGAACTAAAACAATAGGAAAATTAAATGAAGTATTGTTTTATATTACCTTTATAGTATTTTTAATA
CCTGTTTTTTCAATAAAAAAGGCTGATATACTAAATCTACAACCAGTTCTGGGCGGTGGAGTAAAAAATATTATAAAGGC
TACAAAAAAAACCATTATAGCCTACTCAGGAGCAGAAATGCTTCTTATATTATACCCCCTTGTACATGAAAATGTAAAAC
TGAAAAAAATAGGTCTTAAAAGCATATCCTTCATTACAATTTTATATACTTTATATACTTTACTTACTATATTATACTTA
GGAATTGGTGCCGCTGATAAATTTTTATGGCCAGTTATAACCATATCTAGAGGTATAACAATCCCTGTAATAAATTCTTT
TAGCTATATATTTTTATCTCTCTGGACTATGACTATGTTTAAATGTATATCTGTACATTATTATTTATTTGCTCATGGAT
TAAATAAAATATTTAATAAACTTAGTAGAAAAAGCTGGGCAATACTACTCTATCCTATAATGATTATAGGATCAAGTCTA
TACGGTATTCCAGTTATGAGGAGAAATTTTTTAGATAAAATTTTCCCACCCTATGTAATTTTTAATATTATATTTATTTC
TATTACTGCTTTATTAGTAGCTTTAGGAAAAGGTGATGAAAATGAAAAATAA

Upstream 100 bases:

>100_bases
AGAAGCCCTGTTTATAAAATGAATAAGCGTCCAAAAGTTATCCCTAATTCAAATCCAACTAGACAAAGTAATTTTAGAGA
TTTGTTTAGGAGGAAAAATA

Downstream 100 bases:

>100_bases
AATGAAAATAATAATAAGAGTTTCTTTTGTTTTAATTATAATTGTTAATTTAATAGGGAAAAGAGGGACTGTGGTAGAAG
AACTAAATCTTCCCAATAGC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MMNNKEDALTESQLTFMFIGSLIGITLLSLPLDPIKIAKQDAWIAAFLGMIYPTYVVFIAIYIRKKYPKKNILDLSKKIY
GKILGNILNLIFISFFFLIATDVAAGINNVLRNYMVSFLNSWNILSLLFLGAAYTVYGGTKTIGKLNEVLFYITFIVFLI
PVFSIKKADILNLQPVLGGGVKNIIKATKKTIIAYSGAEMLLILYPLVHENVKLKKIGLKSISFITILYTLYTLLTILYL
GIGAADKFLWPVITISRGITIPVINSFSYIFLSLWTMTMFKCISVHYYLFAHGLNKIFNKLSRKSWAILLYPIMIIGSSL
YGIPVMRRNFLDKIFPPYVIFNIIFISITALLVALGKGDENEK

Sequences:

>Translated_363_residues
MMNNKEDALTESQLTFMFIGSLIGITLLSLPLDPIKIAKQDAWIAAFLGMIYPTYVVFIAIYIRKKYPKKNILDLSKKIY
GKILGNILNLIFISFFFLIATDVAAGINNVLRNYMVSFLNSWNILSLLFLGAAYTVYGGTKTIGKLNEVLFYITFIVFLI
PVFSIKKADILNLQPVLGGGVKNIIKATKKTIIAYSGAEMLLILYPLVHENVKLKKIGLKSISFITILYTLYTLLTILYL
GIGAADKFLWPVITISRGITIPVINSFSYIFLSLWTMTMFKCISVHYYLFAHGLNKIFNKLSRKSWAILLYPIMIIGSSL
YGIPVMRRNFLDKIFPPYVIFNIIFISITALLVALGKGDENEK
>Mature_363_residues
MMNNKEDALTESQLTFMFIGSLIGITLLSLPLDPIKIAKQDAWIAAFLGMIYPTYVVFIAIYIRKKYPKKNILDLSKKIY
GKILGNILNLIFISFFFLIATDVAAGINNVLRNYMVSFLNSWNILSLLFLGAAYTVYGGTKTIGKLNEVLFYITFIVFLI
PVFSIKKADILNLQPVLGGGVKNIIKATKKTIIAYSGAEMLLILYPLVHENVKLKKIGLKSISFITILYTLYTLLTILYL
GIGAADKFLWPVITISRGITIPVINSFSYIFLSLWTMTMFKCISVHYYLFAHGLNKIFNKLSRKSWAILLYPIMIIGSSL
YGIPVMRRNFLDKIFPPYVIFNIIFISITALLVALGKGDENEK

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 40991; Mature: 40991

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNKEDALTESQLTFMFIGSLIGITLLSLPLDPIKIAKQDAWIAAFLGMIYPTYVVFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYIRKKYPKKNILDLSKKIYGKILGNILNLIFISFFFLIATDVAAGINNVLRNYMVSFLN
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SWNILSLLFLGAAYTVYGGTKTIGKLNEVLFYITFIVFLIPVFSIKKADILNLQPVLGGG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
VKNIIKATKKTIIAYSGAEMLLILYPLVHENVKLKKIGLKSISFITILYTLYTLLTILYL
HHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHH
GIGAADKFLWPVITISRGITIPVINSFSYIFLSLWTMTMFKCISVHYYLFAHGLNKIFNK
HCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRKSWAILLYPIMIIGSSLYGIPVMRRNFLDKIFPPYVIFNIIFISITALLVALGKGDE
HHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
NEK
CCC
>Mature Secondary Structure
MMNNKEDALTESQLTFMFIGSLIGITLLSLPLDPIKIAKQDAWIAAFLGMIYPTYVVFIA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYIRKKYPKKNILDLSKKIYGKILGNILNLIFISFFFLIATDVAAGINNVLRNYMVSFLN
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SWNILSLLFLGAAYTVYGGTKTIGKLNEVLFYITFIVFLIPVFSIKKADILNLQPVLGGG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCC
VKNIIKATKKTIIAYSGAEMLLILYPLVHENVKLKKIGLKSISFITILYTLYTLLTILYL
HHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHH
GIGAADKFLWPVITISRGITIPVINSFSYIFLSLWTMTMFKCISVHYYLFAHGLNKIFNK
HCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRKSWAILLYPIMIIGSSLYGIPVMRRNFLDKIFPPYVIFNIIFISITALLVALGKGDE
HHHCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
NEK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]