| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379864
Identifier: 148379864
GI number: 148379864
Start: 2024894
End: 2025301
Strand: Reverse
Name: 148379864
Synonym: CBO1903
Alternate gene names: NA
Gene position: 2025301-2024894 (Counterclockwise)
Preceding gene: 148379865
Following gene: 148379863
Centisome position: 52.11
GC content: 23.53
Gene sequence:
>408_bases TTGTATGCATTGTTTATGGGATGCTTATGTATATTTTCTAGTTTATTTATTCTTAAAATGGAAAACATAAAGTGGCAAAA CGGCCGCAAGGAACTTAGAGCTTTAAGCAAAGTAAGTAATGTACAAAGGGATAGAGAATATGTGTTATCTTATATAGATA AATTTTTTTATGACAATATAGATAATATAAATTCAGATAATATATATAATTTTATAAGAAGTTTAGATAAAAATTTTAAA GTTACTTTAAGTAATAGTTCGGCTTACTTTTATAATGGAGATTTAATAATAGATTATTACAAAAATAAGCTTTTTTATAA GCAAGAAAAATACAAAATTTCTACTAAGGATTCTAATATAGCTTATAAAAGGGAGTATGTATCCTATGAAAGGAAAGTGA GTAATTAA
Upstream 100 bases:
>100_bases AAGAAAAGGGTGATGTAATACATTTAAAGATAGTAGGAAAGAAAGGGAAAGAATATATAAGATGTTTAATAAAAAAAGAA TAAATAAAGGATATATACTT
Downstream 100 bases:
>100_bases TTGTTTAAAAATATTAACTTGTTGGAGATGGATAAAAGCAATATATGCTTAAAGGACATGAAATTTAATAGCTTAAAAGA AAAAAGTGTTATAGAGAATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MYALFMGCLCIFSSLFILKMENIKWQNGRKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDNIYNFIRSLDKNFK VTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN
Sequences:
>Translated_135_residues MYALFMGCLCIFSSLFILKMENIKWQNGRKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDNIYNFIRSLDKNFK VTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN >Mature_135_residues MYALFMGCLCIFSSLFILKMENIKWQNGRKELRALSKVSNVQRDREYVLSYIDKFFYDNIDNINSDNIYNFIRSLDKNFK VTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNIAYKREYVSYERKVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16296; Mature: 16296
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYALFMGCLCIFSSLFILKMENIKWQNGRKELRALSKVSNVQRDREYVLSYIDKFFYDNI CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DNINSDNIYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNI CCCCCHHHHHHHHHCCCCEEEEEECCEEEEEECCEEEEEECCCCEEECCCEEEECCCCCC AYKREYVSYERKVSN HHHHHHHHHHHHCCC >Mature Secondary Structure MYALFMGCLCIFSSLFILKMENIKWQNGRKELRALSKVSNVQRDREYVLSYIDKFFYDNI CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DNINSDNIYNFIRSLDKNFKVTLSNSSAYFYNGDLIIDYYKNKLFYKQEKYKISTKDSNI CCCCCHHHHHHHHHCCCCEEEEEECCEEEEEECCEEEEEECCCCEEECCCEEEECCCCCC AYKREYVSYERKVSN HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA