Definition Clostridium botulinum A str. ATCC 3502, complete genome.
Accession NC_009495
Length 3,886,916

Click here to switch to the map view.

The map label for this gene is 148379803

Identifier: 148379803

GI number: 148379803

Start: 1964880

End: 1965167

Strand: Reverse

Name: 148379803

Synonym: CBO1843

Alternate gene names: NA

Gene position: 1965167-1964880 (Counterclockwise)

Preceding gene: 148379806

Following gene: 148379801

Centisome position: 50.56

GC content: 19.44

Gene sequence:

>288_bases
ATGATATTTTTAAGAGCAGAAAAAGGAACTGAAAAAATATACACAGATATAGATACTTTAGCAATAAGAGAAAATAAATT
TAGCTATAGTATTAAAAAAGATATGTTTACGCTAATAATAATTATGTTATTATTTATTATATTACGAATAATTTTAGACT
CATTTATAAATATAAAAATCCTTAATTTCACTGTAGAAATAATAATTGCAGGATTAATAGGATTTACAGTTGCTTTATTT
ATTGGCTATTTAAAGATTAAATTAAAACCTAATAAGTATAGAAAATAA

Upstream 100 bases:

>100_bases
TTACATTTGTTGCCAATAATTAGATAATGATTCAGATAAAAAAGAATACATTCAACTATTAAAAGATGCAGGTTGGAATT
TTATAAGTCAATACGATAAT

Downstream 100 bases:

>100_bases
ATAATCTCATTTTTATACTTTATACATAGTAGGTATTTCTCATATAAGAAATTAAACCTACTTAATTTTTTATATGAGAA
ATACAAATATAATTGTAGAT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIFLRAEKGTEKIYTDIDTLAIRENKFSYSIKKDMFTLIIIMLLFIILRIILDSFINIKILNFTVEIIIAGLIGFTVALF
IGYLKIKLKPNKYRK

Sequences:

>Translated_95_residues
MIFLRAEKGTEKIYTDIDTLAIRENKFSYSIKKDMFTLIIIMLLFIILRIILDSFINIKILNFTVEIIIAGLIGFTVALF
IGYLKIKLKPNKYRK
>Mature_95_residues
MIFLRAEKGTEKIYTDIDTLAIRENKFSYSIKKDMFTLIIIMLLFIILRIILDSFINIKILNFTVEIIIAGLIGFTVALF
IGYLKIKLKPNKYRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11120; Mature: 11120

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFLRAEKGTEKIYTDIDTLAIRENKFSYSIKKDMFTLIIIMLLFIILRIILDSFINIKI
CEEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LNFTVEIIIAGLIGFTVALFIGYLKIKLKPNKYRK
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MIFLRAEKGTEKIYTDIDTLAIRENKFSYSIKKDMFTLIIIMLLFIILRIILDSFINIKI
CEEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
LNFTVEIIIAGLIGFTVALFIGYLKIKLKPNKYRK
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA