| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is mutL [H]
Identifier: 148379758
GI number: 148379758
Start: 1914748
End: 1916517
Strand: Reverse
Name: mutL [H]
Synonym: CBO1799
Alternate gene names: 148379758
Gene position: 1916517-1914748 (Counterclockwise)
Preceding gene: 148379759
Following gene: 148379757
Centisome position: 49.31
GC content: 25.08
Gene sequence:
>1770_bases ATGAGGAAAATAAATTTATTAGATTTAGAAACTACAAATAAAATAGCTGCAGGAGAAGTTATAGAAAGACCCTTTTCTGT AGTAAAAGAATTAGTAGAAAATAGTATAGACGCCGGTGCCAAAAATATAACCATAGAAATAGAAGATGGAGGACAAAAGC TTATAAAAATAATAGATGATGGAGAAGGTATTTATCCTATTGATATAAAAAATGCTTTTCTTCCTCATGCTACAAGTAAA ATAAATTCTATAGAGGATATATACAAAATAAGTACTATGGGCTTTAGAGGTGAAGCACTAGCTAGCATTTCTTCCGTATC AAAAACTAAACTTAAAAGTAGAGTTGACTCTTATAATTTTGGAAAAGAAATATATATAGAGGGTGGCAAAATAGAGTACT TAAAAGATACAGGTTGCAATGTTGGCACTACTATAGAAGTTTCTGATTTATTTTATAATGTACCTGCAAGACTTAAATTT TTGAAAAGTGCAAGAAGTGATAGTAGTTCTATATCAGATATTGTGAATAGGTTTATATTATCCCATCCAGATATATCTTT TAATTTAATAAATAAGGGAAAGCAAAGTATAAAGAGTTATGGTACCGGAAATTTAAAGGACTCTATACGATGTGTATACA ATAAAACAATAAGTGAAAACCTTATAAACTTCGAAAGTCATAAAGATATAATATCTGTATATGGATTTATAGGTAAGCCT GAAATAAGCCGTAAAAGCAGAACAAATCAAAGTATATTTGTAAACAAGCGATATGTTAAAAGTAAATTTATAACTGCTGC AGTAGAAAATGCTTTTAAATCCTTTTTAACAGTAAATAGCTATCCTTTCTTTGTAATATTTATAGATATTTTTCCGGAAT ATATTGATGTAAATGTACATCCTACTAAATCAGAAGTTAAATTTAAAGATGAGAGAGCTATGTTTAAAACTATATTTGAT GCAGTTCATGAAGCCATAAAAGGAGAATTAAAAGAATCCTTTACAAACTTCTTTAATAAAGAAGATATTAATATATATGA TTCTGAAAAATCTATAACTGAACCCATAAAACTAGAGAAAGAAGAAGTACAAATACCAATAGATTTAAATAGTAATAATA AAATTGATATTTTTGGTAATAATATAAATAAACTACCTAACAATACAGAACTTCTTAAAAATATAGGTATTAAAGAAAAA AATACACTTGAAAATAATAATGATTTCTATACTTCTAAACAAAATGAAATATACTATGCTAATAAAAATGATGAATGTTT AAATTCATGTAATAAAGATAACTATAGCAAAATAGAAAAGTCATTACAAAAAGATAATAAAAATCCAGATATCTTATATC TAAATGAGCACAATAGAAATTCTTCACCTATAAATATTAAAGAAAATAAATCTAATAATTTTTATGTAGATATGAAAATA ATAGGACAGTTTAATAATACATATATATTAATAGAAAAGGATAAAGAACTTTATATAATAGATCAACATGCGGCTCATGA AAAAGTGTTATTTGAGAAATTCAAATGCGAAATAGAAAAGGGATATGTAATAAGTCAGATTTTATTATCTCCTGTAGTTA TAGAACTTTCAGAAGATGAATTTAATATATACGAAGAAAACAAGGATATTTTTAAATTAATAGAAGACATGCTTATATTA AATAATCCATATACTTGTCCCCATGGAAGACCTACTATGATTAAATTTACATTAAAAGATTTAGAAAAAAAATTTAAAAG AATACAATGA
Upstream 100 bases:
>100_bases ATATTAATACATACAAAATCCTATAATTTTTATTGACCTAGTACCACTTATAAGTGGTGCTAACCTATATAATAAAATTA TAAGCTATGTGGTGATTTAA
Downstream 100 bases:
>100_bases GGGGGATAAGGAAAAATGATAGATTTATTAATAATTGCAGGTCCTACAGCAGTAGGGAAAACAGATATTTCCATAAAACT TGCAGAAAAACTAAATGGAG
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILSHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKP EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKLIEDMLIL NNPYTCPHGRPTMIKFTLKDLEKKFKRIQ
Sequences:
>Translated_589_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILSHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKP EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKLIEDMLIL NNPYTCPHGRPTMIKFTLKDLEKKFKRIQ >Mature_589_residues MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYPIDIKNAFLPHATSK INSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKF LKSARSDSSSISDIVNRFILSHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKP EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFD AVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEKEEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEK NTLENNNDFYTSKQNEIYYANKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKI IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDEFNIYEENKDIFKLIEDMLIL NNPYTCPHGRPTMIKFTLKDLEKKFKRIQ
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=34.2424242424242, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI4505911, Length=355, Percent_Identity=28.4507042253521, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI189458898, Length=355, Percent_Identity=28.4507042253521, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI4505913, Length=344, Percent_Identity=26.453488372093, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI310128478, Length=344, Percent_Identity=26.453488372093, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI189458896, Length=348, Percent_Identity=28.735632183908, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI263191589, Length=241, Percent_Identity=29.4605809128631, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI310128480, Length=299, Percent_Identity=24.0802675585284, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI91992162, Length=464, Percent_Identity=25.8620689655172, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI91992160, Length=464, Percent_Identity=25.8620689655172, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1790612, Length=336, Percent_Identity=38.6904761904762, Blast_Score=235, Evalue=6e-63, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=32.5, Blast_Score=169, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17562796, Length=351, Percent_Identity=28.2051282051282, Blast_Score=138, Evalue=8e-33, Organism=Saccharomyces cerevisiae, GI6323819, Length=333, Percent_Identity=36.036036036036, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6324247, Length=353, Percent_Identity=29.7450424929178, Blast_Score=127, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6323063, Length=194, Percent_Identity=32.9896907216495, Blast_Score=90, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6325093, Length=262, Percent_Identity=26.7175572519084, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI17136968, Length=334, Percent_Identity=33.5329341317365, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=25.2100840336134, Blast_Score=116, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 67687; Mature: 67687
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1 ; PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDD CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GEGIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNF CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFIL CCEEEEECCEEEEEECCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH SHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKP CCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHHCHHHHHHHCCCHHHHHHHHHCCCCCC EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVH CCCHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEEC PTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEK CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECC EEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEKNTLENNNDFYTSKQNEIYYA CCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE NKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKI CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEE IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDE EECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCC FNIYEENKDIFKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKRIQ CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCC >Mature Secondary Structure MRKINLLDLETTNKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDD CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEC GEGIYPIDIKNAFLPHATSKINSIEDIYKISTMGFRGEALASISSVSKTKLKSRVDSYNF CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GKEIYIEGGKIEYLKDTGCNVGTTIEVSDLFYNVPARLKFLKSARSDSSSISDIVNRFIL CCEEEEECCEEEEEECCCCCCCCEEEEHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH SHPDISFNLINKGKQSIKSYGTGNLKDSIRCVYNKTISENLINFESHKDIISVYGFIGKP CCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEHHCHHHHHHHCCCHHHHHHHHHCCCCCC EISRKSRTNQSIFVNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVH CCCHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEEC PTKSEVKFKDERAMFKTIFDAVHEAIKGELKESFTNFFNKEDINIYDSEKSITEPIKLEK CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEECC EEVQIPIDLNSNNKIDIFGNNINKLPNNTELLKNIGIKEKNTLENNNDFYTSKQNEIYYA CCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEE NKNDECLNSCNKDNYSKIEKSLQKDNKNPDILYLNEHNRNSSPINIKENKSNNFYVDMKI CCCHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEE IGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELSEDE EECCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCC FNIYEENKDIFKLIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKRIQ CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA