| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379722
Identifier: 148379722
GI number: 148379722
Start: 1871048
End: 1871611
Strand: Direct
Name: 148379722
Synonym: CBO1762
Alternate gene names: NA
Gene position: 1871048-1871611 (Clockwise)
Preceding gene: 148379721
Following gene: 148379723
Centisome position: 48.14
GC content: 19.86
Gene sequence:
>564_bases ATGAAACAAAAAATATTAGATATAACCTCTAAAAATATAGAATTATATGGGTTGAAAAAATTTACCATGGATGATATATC CTATGATCTTAAAATAAGTAAAAAAACCATATACAAGTATTTTAAAAGTAAGAATGATCTAATAAGCCAATATTTTAATG AAATAATAGACAGTGATAAAAAAAGCACTTTAGAATTATTAGAAAAGAAAATGCCTTTAGACGAAAAATTATATAATATA ATCTATTCTTATCATAAATATAAATTATCAGTAAGGATTTTGGATGAAGCTTATAAATTCTATCCTGAGGAATTTAAAAA AATTCAAGAGTTTAAAGATTTTAAAATAGATTTAGTAAAAAAAATTTTAAGAGAAGGTAAAAATCAAGGGGTAATAGAAG AAAATATAAATATAAATATAGTAAGTTTAATTTTAGAAAAAGTTAGTGATACATTTTTAGACTATAAATTTTTAACTAAT AATAATATTACTATGAAACAAGCCATGGTAGATTTGATGAATATACTATTAAATGGTATTTTAAATGAAAATTATAATGG GTAA
Upstream 100 bases:
>100_bases AATAGATGTATAATATAAAGAAAAAATACTTAATTAAAAACCTTTAGTATACAAAATAAATGGTATATTATATACCATTT ACATAAAGGAGAATAAAATA
Downstream 100 bases:
>100_bases AACTCCTGATATTAGAGAAAATTTAGTTAAGTAGGAGGCATTAAGACGATCAAAAGATGCTTATGTATTAGCTTATGATT CTAAATTCGATAAAATAAGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKQKILDITSKNIELYGLKKFTMDDISYDLKISKKTIYKYFKSKNDLISQYFNEIIDSDKKSTLELLEKKMPLDEKLYNI IYSYHKYKLSVRILDEAYKFYPEEFKKIQEFKDFKIDLVKKILREGKNQGVIEENININIVSLILEKVSDTFLDYKFLTN NNITMKQAMVDLMNILLNGILNENYNG
Sequences:
>Translated_187_residues MKQKILDITSKNIELYGLKKFTMDDISYDLKISKKTIYKYFKSKNDLISQYFNEIIDSDKKSTLELLEKKMPLDEKLYNI IYSYHKYKLSVRILDEAYKFYPEEFKKIQEFKDFKIDLVKKILREGKNQGVIEENININIVSLILEKVSDTFLDYKFLTN NNITMKQAMVDLMNILLNGILNENYNG >Mature_187_residues MKQKILDITSKNIELYGLKKFTMDDISYDLKISKKTIYKYFKSKNDLISQYFNEIIDSDKKSTLELLEKKMPLDEKLYNI IYSYHKYKLSVRILDEAYKFYPEEFKKIQEFKDFKIDLVKKILREGKNQGVIEENININIVSLILEKVSDTFLDYKFLTN NNITMKQAMVDLMNILLNGILNENYNG
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22277; Mature: 22277
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKILDITSKNIELYGLKKFTMDDISYDLKISKKTIYKYFKSKNDLISQYFNEIIDSDK CCCCHHHHCCCCEEEEEEEEHHHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCC KSTLELLEKKMPLDEKLYNIIYSYHKYKLSVRILDEAYKFYPEEFKKIQEFKDFKIDLVK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHH KILREGKNQGVIEENININIVSLILEKVSDTFLDYKFLTNNNITMKQAMVDLMNILLNGI HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH LNENYNG HCCCCCC >Mature Secondary Structure MKQKILDITSKNIELYGLKKFTMDDISYDLKISKKTIYKYFKSKNDLISQYFNEIIDSDK CCCCHHHHCCCCEEEEEEEEHHHCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCC KSTLELLEKKMPLDEKLYNIIYSYHKYKLSVRILDEAYKFYPEEFKKIQEFKDFKIDLVK HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHH KILREGKNQGVIEENININIVSLILEKVSDTFLDYKFLTNNNITMKQAMVDLMNILLNGI HHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH LNENYNG HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA