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The map label for this gene is yoqD [H]

Identifier: 148379641

GI number: 148379641

Start: 1825217

End: 1825915

Strand: Direct

Name: yoqD [H]

Synonym: CBO1683

Alternate gene names: 148379641

Gene position: 1825217-1825915 (Clockwise)

Preceding gene: 148379640

Following gene: 148379642

Centisome position: 46.96

GC content: 28.18

Gene sequence:

>699_bases
ATGAAAGAATTGCAAGTATTAAACAATAAAAACTTAACTTTAGAAAGTACAGAAGTATCTGAAATGACAGGCAAAGAACA
TAAAAACTTAATGAGGGATATAAGAAATTATGTTGGTATTCTGGAAGGCTCAAATTTGAGCAGTCATGATTATTTCATAG
AATCAACTTATATAAATTCACAGAATAAAGAACAACCATGTTATCTACTTACAAAAATGGGTTGTGAAATGGTAGCAAAT
AAAATGACAGGTAAAAAAGGAGTTTTATTCACTGCTAAATATGTTAAAAGATTTAATCAAATAGAACAAAATGAATTACC
AAAAATAAGTACAGAGTTAAGAGCTATATTAATGCTAGATAATAAAACAATTGAGATAGAAGAAAAGGTAACTAACTTAG
AAAATAATATCCCACTTTTTAATGTGGAATGTAAAGAACTCCAAGCATTAGTAAGAAAAATAGGTATTAAAACACTAGGA
GGTTATAAGACACCAGCCTATAATGATAGATCATTACGTACAAAGGTATATACAGACATCCAACACCAGTTAAAAAGGGA
ATTCGGTGTTACTAGATATGAAGCAATAAAGAGAAAACAATTAGATAAAGCAAAAGAGATATTAGTAAGCTACACAGTTC
CAGTTTATTTAAAAGAAGAAATATTTAATACAAACAATCAAGAAGAATGGGAGTGCTAA

Upstream 100 bases:

>100_bases
TTACGAAAATGGGAGGATACCACTCCCAGCAACATTAAAAAAATTTAGTGATAAATTAGATGTTGATTTAGCAAAAGCGC
TTATGGAAGGGGATATGTAA

Downstream 100 bases:

>100_bases
AATGAGTAGTTTTTATAAAGCGAAGGAAGTAGCGAAAATATTAGATATAAGCGTTACCCAATCTTATAGAATAATAAAAA
AACTTAATGAAGAATTAGAC

Product: antirepressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKELQVLNNKNLTLESTEVSEMTGKEHKNLMRDIRNYVGILEGSNLSSHDYFIESTYINSQNKEQPCYLLTKMGCEMVAN
KMTGKKGVLFTAKYVKRFNQIEQNELPKISTELRAILMLDNKTIEIEEKVTNLENNIPLFNVECKELQALVRKIGIKTLG
GYKTPAYNDRSLRTKVYTDIQHQLKREFGVTRYEAIKRKQLDKAKEILVSYTVPVYLKEEIFNTNNQEEWEC

Sequences:

>Translated_232_residues
MKELQVLNNKNLTLESTEVSEMTGKEHKNLMRDIRNYVGILEGSNLSSHDYFIESTYINSQNKEQPCYLLTKMGCEMVAN
KMTGKKGVLFTAKYVKRFNQIEQNELPKISTELRAILMLDNKTIEIEEKVTNLENNIPLFNVECKELQALVRKIGIKTLG
GYKTPAYNDRSLRTKVYTDIQHQLKREFGVTRYEAIKRKQLDKAKEILVSYTVPVYLKEEIFNTNNQEEWEC
>Mature_232_residues
MKELQVLNNKNLTLESTEVSEMTGKEHKNLMRDIRNYVGILEGSNLSSHDYFIESTYINSQNKEQPCYLLTKMGCEMVAN
KMTGKKGVLFTAKYVKRFNQIEQNELPKISTELRAILMLDNKTIEIEEKVTNLENNIPLFNVECKELQALVRKIGIKTLG
GYKTPAYNDRSLRTKVYTDIQHQLKREFGVTRYEAIKRKQLDKAKEILVSYTVPVYLKEEIFNTNNQEEWEC

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005039
- InterPro:   IPR014054
- InterPro:   IPR019104 [H]

Pfam domain/function: PF03374 ANT; PF09669 Phage_pRha [H]

EC number: NA

Molecular weight: Translated: 27060; Mature: 27060

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELQVLNNKNLTLESTEVSEMTGKEHKNLMRDIRNYVGILEGSNLSSHDYFIESTYINS
CCCCEEECCCCCEEECCHHHHHHCHHHHHHHHHHHHHHCEECCCCCCCCCEEEEEEEECC
QNKEQPCYLLTKMGCEMVANKMTGKKGVLFTAKYVKRFNQIEQNELPKISTELRAILMLD
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHEEEEEEC
NKTIEIEEKVTNLENNIPLFNVECKELQALVRKIGIKTLGGYKTPAYNDRSLRTKVYTDI
CCEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHH
QHQLKREFGVTRYEAIKRKQLDKAKEILVSYTVPVYLKEEIFNTNNQEEWEC
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKELQVLNNKNLTLESTEVSEMTGKEHKNLMRDIRNYVGILEGSNLSSHDYFIESTYINS
CCCCEEECCCCCEEECCHHHHHHCHHHHHHHHHHHHHHCEECCCCCCCCCEEEEEEEECC
QNKEQPCYLLTKMGCEMVANKMTGKKGVLFTAKYVKRFNQIEQNELPKISTELRAILMLD
CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHEEEEEEC
NKTIEIEEKVTNLENNIPLFNVECKELQALVRKIGIKTLGGYKTPAYNDRSLRTKVYTDI
CCEEEHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHH
QHQLKREFGVTRYEAIKRKQLDKAKEILVSYTVPVYLKEEIFNTNNQEEWEC
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]