| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is pbuO [H]
Identifier: 148379619
GI number: 148379619
Start: 1804720
End: 1806021
Strand: Direct
Name: pbuO [H]
Synonym: CBO1662
Alternate gene names: 148379619
Gene position: 1804720-1806021 (Clockwise)
Preceding gene: 148379618
Following gene: 148379620
Centisome position: 46.43
GC content: 28.8
Gene sequence:
>1302_bases GTGGAAAATAAATTTAATAGTTTATTCAATATTAAGAAGTATAATACTACAGTCAAAGGAGAAATATTAGCAGGTTTTAC CTCATTTTTTGCAATTGTATATATAATTGCTGTAAATGCATCTATATTATCCGATGCAGGTTTGCCTTTAGAAGGAGCAA TAATAGCTACAGTACTATCCTCATTTGTAGGATGTATATTAGTTGGAGTCATAAGTAATGCACCACTAATTTTAGTTCCA GGCATGGGAGTTAATGCTCTTTTTTCCTATACTATTGTAGGTTCTATGGGGCTTTCATGGCAGCAAGCATTAGCAGCGGT ATTTGTATCAGGAGTTGTATTTTCCATAATAGCTTTTACAAGGTTTTCTAAAACCCTCATAGAATCAATCCCAACTTCCT TAAAGGAAGCTATAACTGTGGGAATTGGTGTTTTAATTACATTTATAGGATTACAAAAAAGTGGGATTGTAATAGGAAGT ACGACAACTTTTGTTGCATTAGGAAATTTTAATAATCCACTAGTATATGTAACTTTTATTAATTTAATAATTACATTAAT ATTATTTATAAAAAATGTGCCAGGAAATTTTTTAATAAGCATGATTGTTGGAACGATTATATCATATTTTTTGGGACTTA TAGATATGGCAAAGCTTACTTTTTCAAATTTTTCATTAGGCGCTTATAAAGAGGTTTTCTTTAAAATGGATTTTAGTAGC GCTACTTCCATAACCTTTTGGATAGCAGTATTTTCATTAACGCTAGTACTTGTATTTGAAAATTTAGGGCTTTTACATGC TCATATAAATGTTATGTTAAAGGAAGAAAATAAATTTAAAACTTCTTTTAAAGCTTGTTCGCTATCTGCTATTACTTGTG GATTTTTTGGAACGAGTCCTACAGTAGCTACTATAGAAACTGCAGCTGGGATAACTGCAGGAGGAAAAACTGGATTAACA TCTATTTTTACAGGAATTTTATTTTTATTATCATTATTTTTACTTCCAATTATAAAAATCATACCTAATAGTGCTATTTC ACCTATACTTATTGTTATAGGAGGATTAATGATAAAAAATATATTAAGTATTAATTTTAATGATTTTTCAGAAGGTTTTC CTGCTTTTTTAATTATAGTTATGATTCCACTAACTTTTAGTATTGTAGATGGTATGGCTTTTGGATTTATTTGCTATCCG ATTGTAAAGTTAGCGGGAAAAAAATCAAAAGAAATTTCTTATGCAATGTATATAATTTCACTTATGTTCTTGTTAAATTT TATATTACATGCAGTAAGCTGA
Upstream 100 bases:
>100_bases AATATAATTGATTATATTAATAGTTTTTAATATAATATTTAATGCATTATAAAAATATAATGTGGGTGGGAGAGGGATAA AAGAAAAGGACGAAGGAGAA
Downstream 100 bases:
>100_bases AGTTATAATTGTCTATTTTAAAAATAAATAATGAACCCTGTTTAATTATTGAGAAGCATAACTAAACAGGGTTTTAATTT TGCTTCATATATATAAAGTT
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MENKFNSLFNIKKYNTTVKGEILAGFTSFFAIVYIIAVNASILSDAGLPLEGAIIATVLSSFVGCILVGVISNAPLILVP GMGVNALFSYTIVGSMGLSWQQALAAVFVSGVVFSIIAFTRFSKTLIESIPTSLKEAITVGIGVLITFIGLQKSGIVIGS TTTFVALGNFNNPLVYVTFINLIITLILFIKNVPGNFLISMIVGTIISYFLGLIDMAKLTFSNFSLGAYKEVFFKMDFSS ATSITFWIAVFSLTLVLVFENLGLLHAHINVMLKEENKFKTSFKACSLSAITCGFFGTSPTVATIETAAGITAGGKTGLT SIFTGILFLLSLFLLPIIKIIPNSAISPILIVIGGLMIKNILSINFNDFSEGFPAFLIIVMIPLTFSIVDGMAFGFICYP IVKLAGKKSKEISYAMYIISLMFLLNFILHAVS
Sequences:
>Translated_433_residues MENKFNSLFNIKKYNTTVKGEILAGFTSFFAIVYIIAVNASILSDAGLPLEGAIIATVLSSFVGCILVGVISNAPLILVP GMGVNALFSYTIVGSMGLSWQQALAAVFVSGVVFSIIAFTRFSKTLIESIPTSLKEAITVGIGVLITFIGLQKSGIVIGS TTTFVALGNFNNPLVYVTFINLIITLILFIKNVPGNFLISMIVGTIISYFLGLIDMAKLTFSNFSLGAYKEVFFKMDFSS ATSITFWIAVFSLTLVLVFENLGLLHAHINVMLKEENKFKTSFKACSLSAITCGFFGTSPTVATIETAAGITAGGKTGLT SIFTGILFLLSLFLLPIIKIIPNSAISPILIVIGGLMIKNILSINFNDFSEGFPAFLIIVMIPLTFSIVDGMAFGFICYP IVKLAGKKSKEISYAMYIISLMFLLNFILHAVS >Mature_433_residues MENKFNSLFNIKKYNTTVKGEILAGFTSFFAIVYIIAVNASILSDAGLPLEGAIIATVLSSFVGCILVGVISNAPLILVP GMGVNALFSYTIVGSMGLSWQQALAAVFVSGVVFSIIAFTRFSKTLIESIPTSLKEAITVGIGVLITFIGLQKSGIVIGS TTTFVALGNFNNPLVYVTFINLIITLILFIKNVPGNFLISMIVGTIISYFLGLIDMAKLTFSNFSLGAYKEVFFKMDFSS ATSITFWIAVFSLTLVLVFENLGLLHAHINVMLKEENKFKTSFKACSLSAITCGFFGTSPTVATIETAAGITAGGKTGLT SIFTGILFLLSLFLLPIIKIIPNSAISPILIVIGGLMIKNILSINFNDFSEGFPAFLIIVMIPLTFSIVDGMAFGFICYP IVKLAGKKSKEISYAMYIISLMFLLNFILHAVS
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine. May work at purine concentrations higher than 100 uM [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=439, Percent_Identity=32.1184510250569, Blast_Score=236, Evalue=1e-63, Organism=Escherichia coli, GI1790150, Length=432, Percent_Identity=32.4074074074074, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI48994909, Length=434, Percent_Identity=31.1059907834101, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1790499, Length=434, Percent_Identity=30.4147465437788, Blast_Score=175, Evalue=5e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46531; Mature: 46531
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKFNSLFNIKKYNTTVKGEILAGFTSFFAIVYIIAVNASILSDAGLPLEGAIIATVLS CCCHHHHHHEEHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SFVGCILVGVISNAPLILVPGMGVNALFSYTIVGSMGLSWQQALAAVFVSGVVFSIIAFT HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFSKTLIESIPTSLKEAITVGIGVLITFIGLQKSGIVIGSTTTFVALGNFNNPLVYVTFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCEEHHHHH NLIITLILFIKNVPGNFLISMIVGTIISYFLGLIDMAKLTFSNFSLGAYKEVFFKMDFSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCC ATSITFWIAVFSLTLVLVFENLGLLHAHINVMLKEENKFKTSFKACSLSAITCGFFGTSP CHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCCC TVATIETAAGITAGGKTGLTSIFTGILFLLSLFLLPIIKIIPNSAISPILIVIGGLMIKN CCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ILSINFNDFSEGFPAFLIIVMIPLTFSIVDGMAFGFICYPIVKLAGKKSKEISYAMYIIS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LMFLLNFILHAVS HHHHHHHHHHHCC >Mature Secondary Structure MENKFNSLFNIKKYNTTVKGEILAGFTSFFAIVYIIAVNASILSDAGLPLEGAIIATVLS CCCHHHHHHEEHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH SFVGCILVGVISNAPLILVPGMGVNALFSYTIVGSMGLSWQQALAAVFVSGVVFSIIAFT HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFSKTLIESIPTSLKEAITVGIGVLITFIGLQKSGIVIGSTTTFVALGNFNNPLVYVTFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCEEHHHHH NLIITLILFIKNVPGNFLISMIVGTIISYFLGLIDMAKLTFSNFSLGAYKEVFFKMDFSS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEECCCC ATSITFWIAVFSLTLVLVFENLGLLHAHINVMLKEENKFKTSFKACSLSAITCGFFGTSP CHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCHHHHHHHHHHHHHEEEECCCCCC TVATIETAAGITAGGKTGLTSIFTGILFLLSLFLLPIIKIIPNSAISPILIVIGGLMIKN CCEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ILSINFNDFSEGFPAFLIIVMIPLTFSIVDGMAFGFICYPIVKLAGKKSKEISYAMYIIS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LMFLLNFILHAVS HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 11591660 [H]