| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379583
Identifier: 148379583
GI number: 148379583
Start: 1759080
End: 1759769
Strand: Direct
Name: 148379583
Synonym: CBO1622
Alternate gene names: NA
Gene position: 1759080-1759769 (Clockwise)
Preceding gene: 148379582
Following gene: 148379584
Centisome position: 45.26
GC content: 24.78
Gene sequence:
>690_bases GTGAATAAAATGGATAATAATAATTTAAATATAGATAAAAATCAGGTCTTAAGATACTTAGGATATAGAGGTCAAGAATT TTCAAGTGAAATAGATAATCTTATAGAGGAATGTATAAAGGAAATAAAAACATTAGTTGATCTAAGAGCTACTTATAAAT ATTCTAGTGTTCATACAAATAATCAGGTTAATTTAGTAGATATTAATTTAAAATTAAAAGGAAAGGATATACTACATCAT TTAGAAAAATCCAATAAATGTTGTGTAATGGCTGCAACTCTGGGAAACAAAGTTGATAGAAAAATATTATATTATGAAAA AGTTAATATGGCTAAAGCAGTAATTTTAGATGCTTGTGCTACAACTGCTATAGAAGAATATTGTGATTTTATAGAAAATG AAATAAAAAAAGAAGTAGAAAAAGATAAGCTAAATATAAATTGGAGATATAGTCCAGGTTATGGTGATTTGGATATATCT GTACAAAAGGATCTATTAAAATCCTTAGATGCTGAAAGAATTATTGGATTAACAGCTTCATCTCATAATATATTAATACC TAGAAAATCTGTAACTGCAATTATAGGTATAATTCCAAAGGAAATTGTAGTAAATAAAAAATCTTGTAGTAAGTGCAATA AATTTAGTAGTTGTAAATTTAGAAAGATAGGTGAGATATGTGAATATTAA
Upstream 100 bases:
>100_bases AAGTTTAAGTTAAAATAGGAAAAGATTTAATATATATTTAAAATAAAAAGTTATATTAAAAATGTAACAATACTTATTAG GTAGGATTTTAATAGATAGG
Downstream 100 bases:
>100_bases GGATTATATAAAAGAAAATGTATTAATATTTGATGGTGCCATGGGAACAATGCTTCAAAAATTAGGGTTAAAGATTTCAG ATTTGCCAGAAGAATTAAAT
Product: hypothetical protein
Products: tetrahydrofolate; L-methionine
Alternate protein names: 5-Methyltetrahydrofolate-Homocysteine Methyltransferase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MNKMDNNNLNIDKNQVLRYLGYRGQEFSSEIDNLIEECIKEIKTLVDLRATYKYSSVHTNNQVNLVDINLKLKGKDILHH LEKSNKCCVMAATLGNKVDRKILYYEKVNMAKAVILDACATTAIEEYCDFIENEIKKEVEKDKLNINWRYSPGYGDLDIS VQKDLLKSLDAERIIGLTASSHNILIPRKSVTAIIGIIPKEIVVNKKSCSKCNKFSSCKFRKIGEICEY
Sequences:
>Translated_229_residues MNKMDNNNLNIDKNQVLRYLGYRGQEFSSEIDNLIEECIKEIKTLVDLRATYKYSSVHTNNQVNLVDINLKLKGKDILHH LEKSNKCCVMAATLGNKVDRKILYYEKVNMAKAVILDACATTAIEEYCDFIENEIKKEVEKDKLNINWRYSPGYGDLDIS VQKDLLKSLDAERIIGLTASSHNILIPRKSVTAIIGIIPKEIVVNKKSCSKCNKFSSCKFRKIGEICEY >Mature_229_residues MNKMDNNNLNIDKNQVLRYLGYRGQEFSSEIDNLIEECIKEIKTLVDLRATYKYSSVHTNNQVNLVDINLKLKGKDILHH LEKSNKCCVMAATLGNKVDRKILYYEKVNMAKAVILDACATTAIEEYCDFIENEIKKEVEKDKLNINWRYSPGYGDLDIS VQKDLLKSLDAERIIGLTASSHNILIPRKSVTAIIGIIPKEIVVNKKSCSKCNKFSSCKFRKIGEICEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.1.13
Molecular weight: Translated: 26161; Mature: 26161
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKMDNNNLNIDKNQVLRYLGYRGQEFSSEIDNLIEECIKEIKTLVDLRATYKYSSVHTN CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEECC NQVNLVDINLKLKGKDILHHLEKSNKCCVMAATLGNKVDRKILYYEKVNMAKAVILDACA CEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEHHCCHHHHEEEEHHHHHHHHHHHHHHHH TTAIEEYCDFIENEIKKEVEKDKLNINWRYSPGYGDLDISVQKDLLKSLDAERIIGLTAS HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHCCHHHEEEEEEC SHNILIPRKSVTAIIGIIPKEIVVNKKSCSKCNKFSSCKFRKIGEICEY CCEEEEECHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNKMDNNNLNIDKNQVLRYLGYRGQEFSSEIDNLIEECIKEIKTLVDLRATYKYSSVHTN CCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEECC NQVNLVDINLKLKGKDILHHLEKSNKCCVMAATLGNKVDRKILYYEKVNMAKAVILDACA CEEEEEEEEEEECCHHHHHHHHCCCCEEEEEEHHCCHHHHEEEEHHHHHHHHHHHHHHHH TTAIEEYCDFIENEIKKEVEKDKLNINWRYSPGYGDLDISVQKDLLKSLDAERIIGLTAS HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHHHHCCHHHEEEEEEC SHNILIPRKSVTAIIGIIPKEIVVNKKSCSKCNKFSSCKFRKIGEICEY CCEEEEECHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-methyltetrahydrofolate; L-homocysteine
Specific reaction: 5-methyltetrahydrofolate + L-homocysteine = tetrahydrofolate + L-methionine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA