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The map label for this gene is yxdM [H]

Identifier: 148379373

GI number: 148379373

Start: 1522749

End: 1524557

Strand: Direct

Name: yxdM [H]

Synonym: CBO1397

Alternate gene names: 148379373

Gene position: 1522749-1524557 (Clockwise)

Preceding gene: 148379372

Following gene: 148379374

Centisome position: 39.18

GC content: 21.45

Gene sequence:

>1809_bases
ATGAGTTTTAATACTATAATTATAAATAATATAAAAAGGAATTTAAGAAAATATAGTGTTTTCATATTAAGTGGTGTAGT
ATCTGTGATAGTATATTATTTCTTTTCTTTAATTTTAAATAATATAGAACTGATACAAGATTCATTTACTATAGGTTTTG
CAGATGATTTGAATTTTATAAAATTATTATTAATAATAGGTATATTCTTTTTAACGGATTATTCCATAAATATATTTTTG
GGGTCCAGGATAGAGGAATTTCAAATATTCTATAAGTTGGGTATTTCTCAGAAAAAGATGAAGAAAATTATTTTTATAGA
AAGCTTATTTTTAGGTATTATAATAACAGTATTTGGAATTATAATAGCTTTTGTATTTTCTAAATTTATGATGATGGGTA
TAGGAAGAGTTTTAAATAAAAAAATAAATACAATAGGAAATCTTAAAGCTATAAAAGATACAATTAAAGTTTTTTTTATT
ATATTTATTATATGTGGTATAACTGAGGGAAGGTATGTAAAAGGAATTAATAAGACATATAAGGAAAGAAAGCCATCCCT
GTTTTTAAGTATAGCTTGTATAATGATGATTATATGTTTGCTTATAATAAGTGTAAGAATGGACTATTTTAAATCCACAG
GAGAAATAATTCTATTTTTTATATTAGGATTCTTGTACACTTTATTAGCTTTAACAGAGTTATTCCCTTATGTACTGACT
AAAATATCAAAAATTAAGCTAATATATATGGATGAAGTAAATATGATTTTTATATCAAATGTTAGAGAAAAAACTCTTCT
AAATAGAAGTGTTCTTTTTGTTATGACTATGTTTTTGTCTATATCTATATTTATATTTGGAATTCTATATGTTCAAAAAG
ATTTAATAGATAAAAATAAGGATATTCTATATCCTATTGATATAGGTTATGTGGTTAAGGAAAAAGATTATAATAATATT
ATAGATAACAAATTAAAAGAAAATAATATTAATTTTGAGAAAGTAAAAGTTACATTTTACGATGTAGAAAGCGCTAAATA
TAGTGTTATATCAGAATCAGAATATAAAAAAATAGCTAATAAACTTTTCTATCCAGTTTATAACATAGAGGAAGGTAAGG
CTGTAATACTATATAATACTAGTATGAGCGAAGAAGATATTAAAAAATATTATTTCAATGAAGTAATAAATATTAATGGT
AATAAAGTTAAAATAAATAAAATAGGAGAAAAAAGTATATTTCAAAGTAAGACTATGGGAAATATTATTATAGTAAAAGA
TAGTTCTTTAATGATATTACCAAAGGATAAAAAGATAAATTATTATATGTATAATATACAAAGTTCTAAAAAAAGTATAA
AAGAATTAGAAAATATAAAAAGAAGTTTGCCTGATGAAAGAATATATATAAAGCAACTAGAATTAATGAAAGAAAGAGGA
TCGGCCTACGGTTTTTTCTACCTTTGTAGCTTTGTAGCCCTAGTTTTTTTCCTTATGGGAGTAAGTTTTTTGTACTATAA
ATTTTATGATGATATAAAGAAAGAAAAAGGTAAATATGATATATTGATAAATTTGGGAATATCTAAAAAAACAGTAAATT
CTATAATAAATAAAGAAATGTTAGTTATGTTTTTTGTACCTTTTTTAATTAGTTCATTGAATTTGTTTTTTATATTTAAG
TTAAATAGATTGATATATAATTACAAAGGAGATGTTTCTGAAACACATGTTTTTATAATATATCTATTTATATATACATT
TTATTTTATGGTTTGGAAAAGGAAGATTATAGAAGAAGTAAATGAATAA

Upstream 100 bases:

>100_bases
AAAGATGGGGAAATATATAGTGAAATTTATATGGGAGAAGATCAGGAAAGCTTTTATAAGGATATATTAAATTTTAATAT
GTTCTTAGGAGGAAGAACTA

Downstream 100 bases:

>100_bases
ATGTGGTATCAATAGTGTATTGAATAACATATAATGGTAAAGAAATTAATATGTAGGAAAGATACAGTATGAATTTTATG
CCCTTTGATAATTATAATAT

Product: peptide ABC transporter, Pep4E family, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 601

Protein sequence:

>602_residues
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDSFTIGFADDLNFIKLLLIIGIFFLTDYSINIFL
GSRIEEFQIFYKLGISQKKMKKIIFIESLFLGIIITVFGIIIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFI
IFIICGITEGRYVKGINKTYKERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFILGFLYTLLALTELFPYVLT
KISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSISIFIFGILYVQKDLIDKNKDILYPIDIGYVVKEKDYNNI
IDNKLKENNINFEKVKVTFYDVESAKYSVISESEYKKIANKLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVINING
NKVKINKIGEKSIFQSKTMGNIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELENIKRSLPDERIYIKQLELMKERG
SAYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKGKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFK
LNRLIYNYKGDVSETHVFIIYLFIYTFYFMVWKRKIIEEVNE

Sequences:

>Translated_602_residues
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDSFTIGFADDLNFIKLLLIIGIFFLTDYSINIFL
GSRIEEFQIFYKLGISQKKMKKIIFIESLFLGIIITVFGIIIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFI
IFIICGITEGRYVKGINKTYKERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFILGFLYTLLALTELFPYVLT
KISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSISIFIFGILYVQKDLIDKNKDILYPIDIGYVVKEKDYNNI
IDNKLKENNINFEKVKVTFYDVESAKYSVISESEYKKIANKLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVINING
NKVKINKIGEKSIFQSKTMGNIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELENIKRSLPDERIYIKQLELMKERG
SAYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKGKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFK
LNRLIYNYKGDVSETHVFIIYLFIYTFYFMVWKRKIIEEVNE
>Mature_601_residues
SFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDSFTIGFADDLNFIKLLLIIGIFFLTDYSINIFLG
SRIEEFQIFYKLGISQKKMKKIIFIESLFLGIIITVFGIIIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFII
FIICGITEGRYVKGINKTYKERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFILGFLYTLLALTELFPYVLTK
ISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSISIFIFGILYVQKDLIDKNKDILYPIDIGYVVKEKDYNNII
DNKLKENNINFEKVKVTFYDVESAKYSVISESEYKKIANKLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVININGN
KVKINKIGEKSIFQSKTMGNIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELENIKRSLPDERIYIKQLELMKERGS
AYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKGKYDILINLGISKKTVNSIINKEMLVMFFVPFLISSLNLFFIFKL
NRLIYNYKGDVSETHVFIIYLFIYTFYFMVWKRKIIEEVNE

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 70703; Mature: 70571

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDSFTIGFADDLNFI
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCHHHH
KLLLIIGIFFLTDYSINIFLGSRIEEFQIFYKLGISQKKMKKIIFIESLFLGIIITVFGI
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFIIFIICGITEGRYVKGINKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFILGFLYTLLALTELFPYVLT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSISIFIFGILYVQKDLIDKNK
HHHHEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DILYPIDIGYVVKEKDYNNIIDNKLKENNINFEKVKVTFYDVESAKYSVISESEYKKIAN
CEEEEECCCEEEECCCCCHHHHCCHHCCCCCEEEEEEEEEEECCCCEEHCCHHHHHHHHH
KLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVININGNKVKINKIGEKSIFQSKTMG
HHHCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHCCCC
NIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELENIKRSLPDERIYIKQLELMKERG
CEEEEECCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
SAYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKGKYDILINLGISKKTVNSIINKEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
LVMFFVPFLISSLNLFFIFKLNRLIYNYKGDVSETHVFIIYLFIYTFYFMVWKRKIIEEV
HHHHHHHHHHHHCHHHHHEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NE
CC
>Mature Secondary Structure 
SFNTIIINNIKRNLRKYSVFILSGVVSVIVYYFFSLILNNIELIQDSFTIGFADDLNFI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEECCCHHHH
KLLLIIGIFFLTDYSINIFLGSRIEEFQIFYKLGISQKKMKKIIFIESLFLGIIITVFGI
HHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIAFVFSKFMMMGIGRVLNKKINTIGNLKAIKDTIKVFFIIFIICGITEGRYVKGINKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KERKPSLFLSIACIMMIICLLIISVRMDYFKSTGEIILFFILGFLYTLLALTELFPYVLT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KISKIKLIYMDEVNMIFISNVREKTLLNRSVLFVMTMFLSISIFIFGILYVQKDLIDKNK
HHHHEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DILYPIDIGYVVKEKDYNNIIDNKLKENNINFEKVKVTFYDVESAKYSVISESEYKKIAN
CEEEEECCCEEEECCCCCHHHHCCHHCCCCCEEEEEEEEEEECCCCEEHCCHHHHHHHHH
KLFYPVYNIEEGKAVILYNTSMSEEDIKKYYFNEVININGNKVKINKIGEKSIFQSKTMG
HHHCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHCCCC
NIIIVKDSSLMILPKDKKINYYMYNIQSSKKSIKELENIKRSLPDERIYIKQLELMKERG
CEEEEECCCEEEEECCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
SAYGFFYLCSFVALVFFLMGVSFLYYKFYDDIKKEKGKYDILINLGISKKTVNSIINKEM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
LVMFFVPFLISSLNLFFIFKLNRLIYNYKGDVSETHVFIIYLFIYTFYFMVWKRKIIEEV
HHHHHHHHHHHHCHHHHHEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]