| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148378995
Identifier: 148378995
GI number: 148378995
Start: 1105168
End: 1105938
Strand: Direct
Name: 148378995
Synonym: CBO1004
Alternate gene names: NA
Gene position: 1105168-1105938 (Clockwise)
Preceding gene: 148378994
Following gene: 148378996
Centisome position: 28.43
GC content: 26.2
Gene sequence:
>771_bases ATGTCTATATCATTAGCATTAGTTCCTGCAGTTTTAACTCTTAAAGTTGTTATGAATGTAAAAGACCTTGATAATTGGGT AGAAAATTCTAAAATAAATATGCCAACAACATTAAAGAATGAGGAAGAGATTATTAAAACTTTGAAGCAGGCAGGATATA AAATAAATAAATATGGAAATTTATTTAAGACAGAGATAAAAGGGGAAAATGAATTTATTATTTGGAAAAAGAAAAAAGGA ATATGGAATGTTGTATTTTCAAAATATGATTCAAAAGAAATGATAGTTGATTTCATAATGAATTTAAATAACAAAGCAGG TAGAAAGGTTATATATAAGTCAATTGAAGAGATGGAAAATAGAAATGACAACTCAACAACAGTAGAAGAAATATTAGAAC TTCCTAAGGTAGAGAAAGAAATCTTTCCTACTAATTTTCGAGATAAGGATTTGCTTTTAAAAACTCTTAAAGAATGCGGA TCTTATCCTAAAGAGATATCTAACGAAGATATTCAGTGTAATACTAAAGAGTGCCAATTAATTTTTCATAAAGGAGAGGA CGGAAGTTATAATGTTGAAATTGAAGATACATCTTCATTAAAAAATGTTTATCATCATCTTAGTATAATAGATGAAGAAT ATAAACATAATGTGCAAGAGTACACCTATAAAAAAGTAGTTGAAAAATTAAATGGAACAGATATGTATATAGATAATGAA GAAGTACTTGAAGATAATTCTATACTTTTAACTGTTAATATAGGAGACTAA
Upstream 100 bases:
>100_bases TAGAAGTAAATGAAGAAAAAAAAGATGAAAAAAAGGGAGAAGATGACATAAGAATATCTAGAGGTGGTAGAACTATAGAT TTTTAAAGGAGGTATAAGCT
Downstream 100 bases:
>100_bases AAAGTGCAATAGGAGAATATATGACGAAATATATAATAAATTGAATATTATTTTTTATAAAAAGATATACAAAAAATAAA TTTATGTATATCTTTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEIKGENEFIIWKKKKG IWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECG SYPKEISNEDIQCNTKECQLIFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYTYKKVVEKLNGTDMYIDNE EVLEDNSILLTVNIGD
Sequences:
>Translated_256_residues MSISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEIKGENEFIIWKKKKG IWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECG SYPKEISNEDIQCNTKECQLIFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYTYKKVVEKLNGTDMYIDNE EVLEDNSILLTVNIGD >Mature_255_residues SISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGNLFKTEIKGENEFIIWKKKKGI WNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMENRNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECGS YPKEISNEDIQCNTKECQLIFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYTYKKVVEKLNGTDMYIDNEE VLEDNSILLTVNIGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29777; Mature: 29646
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCC LFKTEIKGENEFIIWKKKKGIWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMEN EEEEEECCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECGSYPKEISNEDIQCNTKECQL CCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEECCCEEEE IFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYTYKKVVEKLNGTDMYIDNE EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH EVLEDNSILLTVNIGD HHHCCCCEEEEEECCC >Mature Secondary Structure SISLALVPAVLTLKVVMNVKDLDNWVENSKINMPTTLKNEEEIIKTLKQAGYKINKYGN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCC LFKTEIKGENEFIIWKKKKGIWNVVFSKYDSKEMIVDFIMNLNNKAGRKVIYKSIEEMEN EEEEEECCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHC RNDNSTTVEEILELPKVEKEIFPTNFRDKDLLLKTLKECGSYPKEISNEDIQCNTKECQL CCCCCHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCEECCCEEEE IFHKGEDGSYNVEIEDTSSLKNVYHHLSIIDEEYKHNVQEYTYKKVVEKLNGTDMYIDNE EEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCH EVLEDNSILLTVNIGD HHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA