Click here to switch to the map view.

The map label for this gene is 148378978

Identifier: 148378978

GI number: 148378978

Start: 1084223

End: 1084843

Strand: Direct

Name: 148378978

Synonym: CBO0988

Alternate gene names: NA

Gene position: 1084223-1084843 (Clockwise)

Preceding gene: 148378977

Following gene: 148378979

Centisome position: 27.89

GC content: 28.34

Gene sequence:

>621_bases
ATGAGGAAATTTAGGCTTTTTACTGATTATAATAAAGAAGAAAAATGGTTAAATGAAATGTATAAAAAGGGTTATGAATT
GAAAAATATATCTTTTGGATATAAATTTTATTCTATAGAACCGGAAAATGCTACAGTTAGAATTGATTATAGAATTTTTA
AGAATAAAGAAGATTTTATTGACTATTGTACTTTATTTGAAGATAGTGGTTGGAAGCATCTAGCTGGCAATAAAAATTCA
GGAGTTCAATATTTCAAAGAAATTCACAAAAACAGCCAAGAAGATATATTTTCAGATGATATATCTAAAGCAGCAAGATA
TAAAAGATTATCTAATAAATCCATCATATCAGCAGTGTGTTTTTTATCTATGTCTGTAGCTTACATATCCAACGGGAGTA
TTAATATCAATTTAATACTTAATCCTAAATTACTGTATTATACACCAGGATTGTGGGAAAGGACTGGTGAAGCATTTTGG
GGAGGCTTGCTATTTGAAACACCCTTTGCACTTGGAAGAAGTGCTGTATTCTTAATTCCTATAATAGCGGTTTTCTATGC
TTTTTTAGCAATTAAAGCTAGGATATTATATAACAAAGGGAAAAATCTAATTAAAGATTAG

Upstream 100 bases:

>100_bases
GAAAAGGGAAAAGAAGTTTTGCTTTTGGACATTGAAAGAATGCGTCATATGATTAACATAGCAGAAAGTAACTTTAAATT
ATGATTTAGGAGGAATTAAC

Downstream 100 bases:

>100_bases
AAAATTAATCATTTAGTAATATCTTTCATAATATTTTTATTAGTAAACATATAGATTGCATTGAAATTAAAGGTAAAAAT
GTATATAATTAAGCTGTTAA

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGWKHLAGNKNS
GVQYFKEIHKNSQEDIFSDDISKAARYKRLSNKSIISAVCFLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFW
GGLLFETPFALGRSAVFLIPIIAVFYAFLAIKARILYNKGKNLIKD

Sequences:

>Translated_206_residues
MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGWKHLAGNKNS
GVQYFKEIHKNSQEDIFSDDISKAARYKRLSNKSIISAVCFLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFW
GGLLFETPFALGRSAVFLIPIIAVFYAFLAIKARILYNKGKNLIKD
>Mature_206_residues
MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENATVRIDYRIFKNKEDFIDYCTLFEDSGWKHLAGNKNS
GVQYFKEIHKNSQEDIFSDDISKAARYKRLSNKSIISAVCFLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFW
GGLLFETPFALGRSAVFLIPIIAVFYAFLAIKARILYNKGKNLIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24071; Mature: 24071

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENATVRIDYRIFKNKEDFI
CCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCEEEEEEEEECCCHHHH
DYCTLFEDSGWKHLAGNKNSGVQYFKEIHKNSQEDIFSDDISKAARYKRLSNKSIISAVC
HHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFWGGLLFETPFALGRSAVFLIP
HHHHHHHEEECCCEEEEEEECCEEEEECCCHHHHCCHHHHHHHHHHCCHHHCCCHHHHHH
IIAVFYAFLAIKARILYNKGKNLIKD
HHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MRKFRLFTDYNKEEKWLNEMYKKGYELKNISFGYKFYSIEPENATVRIDYRIFKNKEDFI
CCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCEEEEEEEEECCCHHHH
DYCTLFEDSGWKHLAGNKNSGVQYFKEIHKNSQEDIFSDDISKAARYKRLSNKSIISAVC
HHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FLSMSVAYISNGSININLILNPKLLYYTPGLWERTGEAFWGGLLFETPFALGRSAVFLIP
HHHHHHHEEECCCEEEEEEECCEEEEECCCHHHHCCHHHHHHHHHHCCHHHCCCHHHHHH
IIAVFYAFLAIKARILYNKGKNLIKD
HHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA