| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148378959
Identifier: 148378959
GI number: 148378959
Start: 1065317
End: 1066336
Strand: Direct
Name: 148378959
Synonym: CBO0966
Alternate gene names: NA
Gene position: 1065317-1066336 (Clockwise)
Preceding gene: 148378957
Following gene: 148378960
Centisome position: 27.41
GC content: 23.82
Gene sequence:
>1020_bases ATGATTGGTTGGGAGATAAAAAAAATAGCAAAATCAAAAACTACTTTAATCGCAATGGCAATCTTTATTCTTTTAACATC TATAATGGCAATAATAAAACCAACTTTGGAGGATGAAATAAAGCATGTAAATGAACAATATGAAACAGTTGTAGATAAAA GATCACCTATTGTAATTGGAAAAGAAAATTTTAATAAGAAAATTGATGGGTTAGTAGAAGCCTCTAAGTCTAAGGGAAAA GACTCTATGGAAAAAGGGATAGCAGAGGATTCTAAAAAGAAAATAGAAAATATAAAAGATAATGAATATAAAGAGGTTAA TTTTTGGAAGGTGTTTAGTTACAGAAGTACTCATCCAGTTGCTAGTTTCTTTATGTTAATAATGATTATGTTGATTGTTA GTAATATTCATATTAATGAAAAGATATCATCCGTAGATAATTTGATTTTATCATCTAAAAATAAATTTAAATGTTTATAT TCAAAAATGTTTTTAGCTATATTAATACCTGTTATATTTTATTCAGCATATTTAGGATTGGAATTTTTAATAAGCATAAT CCAGTATGGTAAACCAGTAAATGGAGATCTACAAGCTTTTAGAATAATTGATAATTTTGTTCTTCTAAAGGGTGATCCAA CAATAATAAATTATGTTTCATCAAAAATTTTTGTAATGTATTTAGTATTAATAAGTATATCTTTAGTTATATTCTTATTT TCATCTACATTAAGTAATTCTTTAGCAGTAATAAGTGGTGGAGCTATATTTATTGTATTAGGTAAAGTATGCATGCTTCT AAAATTCTTACCTAAAAAGCTATTAATAATACTAGATAAAGTTAACTATATTGATATGCTTAGTTATTTTGATATAAATA TAGGAATGAATTGGGGACAGATATCTATATTTGGCAATAATTTTGATCTTATAAATTTTTCAATAGGAATAGTTGCTTCA ATAATAATACTTAGTACTTTATTAATAACAATAAACTTTAAAAAATTTATAACTAATTAA
Upstream 100 bases:
>100_bases ATAAGTTGTAAGTTAGTGAAACTATAATAATAATTGTTCTGAGGGAAAGAGATAAAAAATTATAAAATATAATGAACTTA ATAAATTAGGAGGAAAAAGT
Downstream 100 bases:
>100_bases ATTGTATGGAGGAATGGAAAATGAATAAATTAGAAATAAAAAATTTAAATAAAAGATTTGGAGTAAAAAAGGCTACTAAT GATATAACAATAACTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNEQYETVVDKRSPIVIGKENFNKKIDGLVEASKSKGK DSMEKGIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHPVASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSKIFVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IIILSTLLITINFKKFITN
Sequences:
>Translated_339_residues MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNEQYETVVDKRSPIVIGKENFNKKIDGLVEASKSKGK DSMEKGIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHPVASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSKIFVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IIILSTLLITINFKKFITN >Mature_339_residues MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNEQYETVVDKRSPIVIGKENFNKKIDGLVEASKSKGK DSMEKGIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHPVASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSKIFVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IIILSTLLITINFKKFITN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38352; Mature: 38352
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNEQYETVVDKRSPIVIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE KENFNKKIDGLVEASKSKGKDSMEKGIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHPV CCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHH ASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLYSKMFLAILIPVIFYSAYLGL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSKIFVMYLVLISISLVIFLF HHHHHHHHCCCCCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKVNYIDMLSYFDINIGMNWGQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCCE ISIFGNNFDLINFSIGIVASIIILSTLLITINFKKFITN EEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGWEIKKIAKSKTTLIAMAIFILLTSIMAIIKPTLEDEIKHVNEQYETVVDKRSPIVIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE KENFNKKIDGLVEASKSKGKDSMEKGIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHPV CCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHH ASFFMLIMIMLIVSNIHINEKISSVDNLILSSKNKFKCLYSKMFLAILIPVIFYSAYLGL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIINYVSSKIFVMYLVLISISLVIFLF HHHHHHHHCCCCCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLIILDKVNYIDMLSYFDINIGMNWGQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCCCE ISIFGNNFDLINFSIGIVASIIILSTLLITINFKKFITN EEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA