| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148378918
Identifier: 148378918
GI number: 148378918
Start: 1032944
End: 1033786
Strand: Direct
Name: 148378918
Synonym: CBO0926
Alternate gene names: NA
Gene position: 1032944-1033786 (Clockwise)
Preceding gene: 148378917
Following gene: 148378919
Centisome position: 26.57
GC content: 28.23
Gene sequence:
>843_bases ATGAAAAATGGAATAACAACATTCAAAGCAATAAGTGCTATATTTGGGGGAATTTTTGTTTTGGTAATCTGCCAATCGCT AAGCCATCTAGCTTATATACTTCCATTGCCGAAGGTAATTACGAGTATGGTTTTTGGAATAACTTATATACTGCTTTCTT ATCTTTTTCTATCAAATTTATGTAAAAAATTTTTTTGTCATAGTTTATTAGAATGTGGTATTGGAAAACCAAAGATTAAT TTTACATGGCTAGTAATTGGAATAATTTTACCAATCATGGTATCTGTATTATTAATTCTTACTCCAGGATACTTTGTTAA TAATGGAAAATCAACAACTGAAATAATAAGTAAAATTATAATTTCTATTTTTACTGTAGGTTGTGCTGCAGTTGTTGAAG AAATGATTTTCAGAGGGTTTATTATGTATATATTGAAACAGCGATGGGGTAAAATGATATCTATATTTGTACCATCAATT GTTTTTGGATTACTTCATACAATGGGAGGAATGAATTTTAGTGATATTTTAATGTTATTTATCGCTGGGACAAGTGTTGG TATAATGTTTTCACTTATTACTTATGAAAGTAAAACAATTTGGCCAAGTGCTATAGTACATGCTATTTGGAATATCATTA TTATTGGAGGCATATTAGACATAGGTGTCAAGCATAACGCTGAATGCATTTATTCATATGTTCTTAATTCAAAATCAATA TTGTTAACTGGGGGACACTTTGGAATAGAAGCATCAGTAATTTCTATAATTGGATATATTGCAGTAATTAGTTTTACAAT GTTTAGAGTTTATAAAAAGAAAGATATTGCCATAGATATTTAA
Upstream 100 bases:
>100_bases ATTTATGGAAAGTATGGTATAATTTTAGTGTTGATAAATCGTAGTTATATTTTATGTTTGAATGATGATATTTTTATTAG GTCAGGAGGAAACATAGAGA
Downstream 100 bases:
>100_bases GTAATAGCTGAGAAAACGAACAATTTACTAAAACACCGCATTATTCAAATATGAATTTTGGGGTGTTTTTCTATAATGCA TCCCCTGGTGCATATAAATA
Product: CAAX amino terminal protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI
Sequences:
>Translated_280_residues MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI >Mature_280_residues MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNLCKKFFCHSLLECGIGKPKIN FTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30949; Mature: 30949
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKKFFCHSLLECGIGKPKINFTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKII HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MKNGITTFKAISAIFGGIFVLVICQSLSHLAYILPLPKVITSMVFGITYILLSYLFLSNL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CKKFFCHSLLECGIGKPKINFTWLVIGIILPIMVSVLLILTPGYFVNNGKSTTEIISKII HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGTSVGIMFSLITYESKTIWPSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE LLTGGHFGIEASVISIIGYIAVISFTMFRVYKKKDIAIDI EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA