| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is ltaS2 [H]
Identifier: 148378594
GI number: 148378594
Start: 689101
End: 690993
Strand: Direct
Name: ltaS2 [H]
Synonym: CBO0593
Alternate gene names: 148378594
Gene position: 689101-690993 (Clockwise)
Preceding gene: 148378592
Following gene: 148378597
Centisome position: 17.73
GC content: 28.47
Gene sequence:
>1893_bases TTGAAAAATATAGTTACGAAAATAATTATTAGAAATTTAGATATAATATTATTTTTAATATTAGTAAGTTTAAAAGTAAT GTTTTATGGAAAAGAAATATCTCCAGAGTTTTTTAGCTATAAGTATATATTATTACCAGTTGTAGCATCTGTGGGAGTAC TATTAGGTATAGGGTATTTCCTCCAAAAACACAAAAGAACTAAATTTTTATATGTGTTAAACATAATAATTAGTTCTATA ATTATAGCAGATTTACTATACTACAGATATTATAAAGACATTATATCTATAGGGGCTATAAGAAATGCCTTTTTATTAGG GGGAGTTGCCTCTAGTATTACAAGTTTGTTTAAACTGAAGGATTGTGTATATTTTCTAGATATATTATTGATTATACCTT TCCTAAAGGTGTATAGAAATATGCCTTATAAGGAAAATAAAAAAATTATAAGAATAGGTGTGGGATCTTTAATATTAGCA GGAGCTATTTTATTAAATGGTATAAATATATATAAATTATCAGTAGATCAACCAGGATTGCTTAATACTATGAGTAATAG GATATATATAACTAAGGTTTTAGGGAATGTAAACTTTCATGTTATAGATGCTTATCAGTTCACAAGAAATAAGATAAATA ATAGTAAAAAGCTTCCAGAAGCTAAAGAAAAAGAGTTAGTAGATAACTTTGAGGGAAAATCACAAATACAGGGAGAAAAA TTAAAGGGTGTAGGAGAAGGAAAAAATTTAATAGTTATACAAGTAGAAGCACTTCAACAATTTGCTATAAATGCAAAGGT GGAAGGTCAGGAAGTAACACCTAATTTAAATAAGTGGATAAATAAAAGTATGTATTTCGATAATTATTTTTATCAAGTAG CAGCAGGGAATACATCTGATGCAGAGTTTTTGTCTAATAATTCATTATATCCTGCAGTTTCAGGAGCAGCTTATTATATG TATAGTGGTAATCAATTTAAATCGCTACCAAGTACACTTCAAGATAAGGGATACTACACAGCGGCTATGCACGGCTATAA AGATGGATTCTGGAATAGAAATGTAATGTATAAAGCTCAAAAGTTCCAAGATTTTCATGGGGAAAGTACTTATAACATAG ATGAACAGGTAGGGTTAGGTCTTAGTGATAAGTCTTTCTTTAATCAATCTTTGGAAAAAATTAAGACTTTTAAACAACCT TTTTATAGTTTTTTAATAACTTTAAGTAGTCATTTCCCTTACGATGATGTAAAAGGATATGGGGAATTTAATGTAGGAAA ATATGAAGGTTCATTTTTAGGTAATTATTTAAAGGGTATACATTATACAGATGCTCAATTAGGAATGTTTTTAGAAAACC TTGAAAAAGAGGGATATTTAGATAATTCAATTGTAGTTATTTATGGAGATCATAATGCTGTATCTAAAAATTATATACAA GAGTTATATGATTTTGTGGGAGAAAAATCACCGAATGATTTAAAATGGTATGAACTTCAAAAGGTACCTATGCTTATACA CTTCCCACAGGACGAATATAAAGGAGTAGATCATACTTATGGTGGTCAAATAGATTTATATCCTACAATAGCTAACTTAT ATAATTTGCCTAGGAAATATATGTTAGGAAATGATTTATTAAATGTAGCTGACCCTAAGGTTACTTTTAGAAATGGATCC TTTACCGATGGAAAAGCTTTTTATATATCTTGGACAGGAGAATACTATGATATAAAAACTGGAGAAAAGATTACTGAAAC AGAGGAACTAAAGGCTAAAAAGCAGGAAAGCGCAAAGGATTTAGAAAGTTCAGATGAACTATTAAATCATAATTTAATAA AAAAATTAGAAAGTGAATCAAAGGGGGAAGGGGAAAGTGAGCAAAGTAAATAG
Upstream 100 bases:
>100_bases TTAAATTAATATAGTGTTTAGTAGATAAACAGAAGATAAATTTAATAATAAGTTTTATAAATATTATTAGTGAGGGATGG AAATGGAGAAGGCTTTAAAG
Downstream 100 bases:
>100_bases GCTCACTTCCAAGTCTCAATTTAATAATAACAGGGTTATGTTAAGAAATTATTATACTAACATTATATTTTCTTAACATA ACCCTATTTTATATAATATA
Product: sulfatase
Products: NA
Alternate protein names: LTA synthase 2; Polyglycerol phosphate synthase 2 [H]
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLNIIISSI IIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILA GAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKSQIQGEK LKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVSGAAYYM YSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQP FYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAVSKNYIQ ELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKVTFRNGS FTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK
Sequences:
>Translated_630_residues MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLNIIISSI IIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILA GAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKSQIQGEK LKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVSGAAYYM YSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQP FYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAVSKNYIQ ELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKVTFRNGS FTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK >Mature_630_residues MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYFLQKHKRTKFLYVLNIIISSI IIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLKDCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILA GAILLNGINIYKLSVDQPGLLNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKSQIQGEK LKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSDAEFLSNNSLYPAVSGAAYYM YSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQKFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQP FYSFLITLSSHFPYDDVKGYGEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAVSKNYIQ ELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKYMLGNDLLNVADPKVTFRNGS FTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKDLESSDELLNHNLIKKLESESKGEGESEQSK
Specific function: Catalyzes the polymerization of lipoteichoic acid (LTA) polyglycerol phosphate, a reaction that presumably uses phosphatidylglycerol (PG) as substrate [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Processed glycerol phosphate lipoteichoic acid synthase 2:Secreted. Note=The secretion into the extracellular medium is dependent on secA and ffh [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LTA synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: 3.1.6.- [C]
Molecular weight: Translated: 71926; Mature: 71926
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLSVDQPGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCH LNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKSQIQGEK HHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCH LKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSD HCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHCEEECCEEEEEECCCCCC AEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQ HHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCCEEEHHH KFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPYDDVKGY HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC GEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAVSKNYIQ CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH ELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKY HHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHHHCCHHH MLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKD HCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHH LESSDELLNHNLIKKLESESKGEGESEQSK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKNIVTKIIIRNLDIILFLILVSLKVMFYGKEISPEFFSYKYILLPVVASVGVLLGIGYF CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LQKHKRTKFLYVLNIIISSIIIADLLYYRYYKDIISIGAIRNAFLLGGVASSITSLFKLK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DCVYFLDILLIIPFLKVYRNMPYKENKKIIRIGVGSLILAGAILLNGINIYKLSVDQPGL HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCH LNTMSNRIYITKVLGNVNFHVIDAYQFTRNKINNSKKLPEAKEKELVDNFEGKSQIQGEK HHHCCCCEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCH LKGVGEGKNLIVIQVEALQQFAINAKVEGQEVTPNLNKWINKSMYFDNYFYQVAAGNTSD HCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHCEEECCEEEEEECCCCCC AEFLSNNSLYPAVSGAAYYMYSGNQFKSLPSTLQDKGYYTAAMHGYKDGFWNRNVMYKAQ HHHHCCCCCCCCCCCCEEEEECCCHHHHCHHHHHHCCCEEEEECCCCCCCCCCCEEEHHH KFQDFHGESTYNIDEQVGLGLSDKSFFNQSLEKIKTFKQPFYSFLITLSSHFPYDDVKGY HHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC GEFNVGKYEGSFLGNYLKGIHYTDAQLGMFLENLEKEGYLDNSIVVIYGDHNAVSKNYIQ CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH ELYDFVGEKSPNDLKWYELQKVPMLIHFPQDEYKGVDHTYGGQIDLYPTIANLYNLPRKY HHHHHHCCCCCCCCCEEEEECCCEEEECCCHHHCCCCCCCCCEEEEHHHHHHHHHCCHHH MLGNDLLNVADPKVTFRNGSFTDGKAFYISWTGEYYDIKTGEKITETEELKAKKQESAKD HCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHH LESSDELLNHNLIKKLESESKGEGESEQSK HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377; 10658653 [H]