| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148378538
Identifier: 148378538
GI number: 148378538
Start: 633562
End: 633987
Strand: Direct
Name: 148378538
Synonym: CBO0536
Alternate gene names: NA
Gene position: 633562-633987 (Clockwise)
Preceding gene: 148378537
Following gene: 148378540
Centisome position: 16.3
GC content: 26.76
Gene sequence:
>426_bases TTGGAAATCAAAAGAGTAGGAACCAATTCACCAATACAAACAGAAAGTAAAAGAACAATAGAAAATAAAAAGGGATTTTC TCAGAATTTTAATTTTGCTCGTCAGCAAAAGTCGGAGCAAGAATTAAAAAAAATGTTGGATGATATAAACAAAAAAGGAA ATAGGCTAGCTATAACTAAATGTTATGCTGATGTTAAAGCATATAAAAGAATGATAAAAGAATATTTAAAATCAGTTTTA GAGTATATGTATTCCGTAAAAAAGGATATAAGTTTTTGGCAAACTCAATACTTTATTACAGTAGAGACAGTAGATGAAAA ACTTCAGGAATTAACAGAAATGTTATTAAGCGCGGAAAAAGAAAATTTAGATATAGCTAAAACTATAGATGATATAACAG GACTTGTTGTAGATATATATAAATAA
Upstream 100 bases:
>100_bases AATTGTTTCACAAATAAAACATATTATATTTATCTATATTTTTGAAAGAAATTTAGCTATAATATATATATGATAAAAAT ATTTAATGGAGTGATTTTAT
Downstream 100 bases:
>100_bases TTTAATTATTATTTATCATTTTCTAAGTAGAAAGTGTTTTATTTAATAAATAGACATAAAAATTATTAAATCATTGAATT TAATAATTTTTATGTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK
Sequences:
>Translated_141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK >Mature_141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16579; Mature: 16579
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHH CYADVKAYKRMIKEYLKSVLEYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENLDIAKTIDDITGLVVDIYK CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHH CYADVKAYKRMIKEYLKSVLEYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENLDIAKTIDDITGLVVDIYK CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA