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The map label for this gene is yjjP [H]

Identifier: 148378462

GI number: 148378462

Start: 547527

End: 548285

Strand: Direct

Name: yjjP [H]

Synonym: CBO0459

Alternate gene names: 148378462

Gene position: 547527-548285 (Clockwise)

Preceding gene: 148378461

Following gene: 148378463

Centisome position: 14.09

GC content: 32.67

Gene sequence:

>759_bases
ATGGAAGCTAAGCAGGTTTTAGAGATTTCACTTTCTGTAGGAAAAATGCTTTTAAGCAATGGGGCAGAATCCTATAGAGT
TGAAGAAACAATTGAGAGAATTTGTAGGGCATATAATTTGCAGTGTGAATGTATGGTTACCGCTAAGGGTGTTTTTTTGT
CTATTATAGATGATAATAATGAAAAGGTAACTTCACTTAAAAAAGTAAAAACAAGAGGAGTAGACTTAGCTAGAATAGAT
CGTCTTAATTCTTTTTCTAGAAGCCTTCAAGATAATCCTATTTCCTATGATGAAGCTAAAGAAACTTTAAAAGAAATAGA
TTCTTTGCCATTTTTCAGTTTACCAGCAAGGATTGTGGCAGCAGGTATGACTTCCTTTGTTTACTCCTTATTTTTTAATG
GTACAATTTATGATGCTATTGTTTCAACTTTTATCAGTATGGGAATTTATTATATGTTAGATAAGGTATCTAAGATTGGA
TTTTTTCAATTTTTTCAATTTTTCTTTGCAGGATTTATCATAGGAATATTAAGTTTAGTTGCGGAAAATGTATCCCCACT
TGTAAGTAGAGCAAATGTTATAACAGGAGGAATAATGATATTGGTTCCAGGAGTACCACTTACAAATGGTATAAAAGATA
TTATCTATGATGATTTTATGTCTGGTATAGTAAAGTTTGGAGAGGCAATGCTAGTGGTAACTGCTATGGGAGCAGGAATT
GCTACAGCATTGACATTGGGAGTAGGTGTTAAGTGGTGA

Upstream 100 bases:

>100_bases
ATTATATAAAAAATTTGATATATTATTTATAAATAAGATATGGTATTAAATACATTACCTAAAATATGTGTGTAAAATAA
ATGGGTGAAGGAGTATAGCT

Downstream 100 bases:

>100_bases
TAAAACAAATTATATTAGCATTTTTTGGAAGCGTGTTTCCCGTTATACTCTTTAATATTGATAGAAAAAAAATAATATGG
ACTGGTTTTGCAGGTTCTAT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECMVTAKGVFLSIIDDNNEKVTSLKKVKTRGVDLARID
RLNSFSRSLQDNPISYDEAKETLKEIDSLPFFSLPARIVAAGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIG
FFQFFQFFFAGFIIGILSLVAENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSGIVKFGEAMLVVTAMGAGI
ATALTLGVGVKW

Sequences:

>Translated_252_residues
MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECMVTAKGVFLSIIDDNNEKVTSLKKVKTRGVDLARID
RLNSFSRSLQDNPISYDEAKETLKEIDSLPFFSLPARIVAAGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIG
FFQFFQFFFAGFIIGILSLVAENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSGIVKFGEAMLVVTAMGAGI
ATALTLGVGVKW
>Mature_252_residues
MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECMVTAKGVFLSIIDDNNEKVTSLKKVKTRGVDLARID
RLNSFSRSLQDNPISYDEAKETLKEIDSLPFFSLPARIVAAGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIG
FFQFFQFFFAGFIIGILSLVAENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSGIVKFGEAMLVVTAMGAGI
ATALTLGVGVKW

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=253, Percent_Identity=23.3201581027668, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 27680; Mature: 27680

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECMVTAKGVFLSIIDDNN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECCC
EKVTSLKKVKTRGVDLARIDRLNSFSRSLQDNPISYDEAKETLKEIDSLPFFSLPARIVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIGFFQFFQFFFAGFIIGILSLV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSGIVKFGEAMLVVTAMGAGI
HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATALTLGVGVKW
HHHHHHHCCCCC
>Mature Secondary Structure
MEAKQVLEISLSVGKMLLSNGAESYRVEETIERICRAYNLQCECMVTAKGVFLSIIDDNN
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEEEEECCC
EKVTSLKKVKTRGVDLARIDRLNSFSRSLQDNPISYDEAKETLKEIDSLPFFSLPARIVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
AGMTSFVYSLFFNGTIYDAIVSTFISMGIYYMLDKVSKIGFFQFFQFFFAGFIIGILSLV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AENVSPLVSRANVITGGIMILVPGVPLTNGIKDIIYDDFMSGIVKFGEAMLVVTAMGAGI
HHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ATALTLGVGVKW
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]