| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is yiaH [C]
Identifier: 148378385
GI number: 148378385
Start: 451403
End: 452434
Strand: Reverse
Name: yiaH [C]
Synonym: CBO0382
Alternate gene names: 148378385
Gene position: 452434-451403 (Counterclockwise)
Preceding gene: 148378393
Following gene: 148378384
Centisome position: 11.64
GC content: 21.32
Gene sequence:
>1032_bases TTGGGGGAGGTAATAAAAATAAAGAACAAAAGAATTGTATCTATGGATCTATTAAGAGCTTTATCTACCATAGCAGTTAT ATTGATTCATGTAACAGGCACTATATTATATAATAGCAATAATAAAAGTTTAACTTATAATTCTTCTCTTGTTTTAAACC AGTTAGCAAGATTTTCAGTACCTGCTTTTATATTTTTATCTGGTTTTGGACTAGCCCTAAGCTATAAAAAGGAAAGTAAA TACCTAGCCTATTTAGGCCATAGACTAAAAAAAGTAGTTCCAGACTACTTTGTATGGTATATTGTATATATTTTTCTATT AGAAGATATAAATCTAAGTTATCATGATAAAATAATTAGCATTTTTCATGGAACACTATACTATCACTTTTATTTTGTTC CTATAATAATTATATTATATTTAATATTTCCTATATTTTATAATTTTTTCAGAACTAAATTAGCATTATTTATTACCTTT TTTCTAAATATGGGCATATATATATTACTTAGATACCCTAATATACCGAAAAGTATTAGTGAAAATTTAACTAGAGAAAG TGTAGTTAGTTGGATATTTTATTTTGTTTTAGGGGTTTATTTTTGTAGTAATTATGATAAAATACATATCTTTATAAAAA AACATAGAAACAAATTACTTTTTCTATTGTTATTATCTACATATATATTATTAAAGGATACATTTTTATGTTTAAGAGCA AATAATGATTTAGATTATGGAACAACTTTTATAAGACCTTCTGTTATGTTATTTAGTATATTTTTCATATTATACATAAT GAGTTTTAATTTTAATAATTTAAGTTTTAAAAAAATATTCTATATGATATCAAAACATTCCTATACAATATATTTATCTC ATCCTTTACTGCTCTATTGGTTAAAAAAATATTATATTGAAAATAAATATATAATAGGAAGCTATAAATTCTTTATAATT GTTTTTTTTACTTGTTTTATTGGCGGTCTCTTAATATCAATATTAATAAATAAATTTAAAAAATTATTATAA
Upstream 100 bases:
>100_bases TTTTAAATTATTATGCTATTATCTGACATATAAGTTTAAGTTACAAAGGATATTAGTAAATATTTTTTATTTTTGATATA ATAATATTTGAAAATTTATA
Downstream 100 bases:
>100_bases ATTTTAATCAACCAATAAATTCTTAAAAATATATGAATTTTACTATATTACTTTATATTTACTATAAAACAATATATAAT ATATATATGTAATTAATATC
Product: membrane-associated acyltransferase
Products: NA
Alternate protein names: Acyltransferase
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLTYNSSLVLNQLARFSVPAFIFLSGFGLALSYKKESK YLAYLGHRLKKVVPDYFVWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITF FLNMGIYILLRYPNIPKSISENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRA NNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFII VFFTCFIGGLLISILINKFKKLL
Sequences:
>Translated_343_residues MGEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLTYNSSLVLNQLARFSVPAFIFLSGFGLALSYKKESK YLAYLGHRLKKVVPDYFVWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITF FLNMGIYILLRYPNIPKSISENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRA NNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFII VFFTCFIGGLLISILINKFKKLL >Mature_342_residues GEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLTYNSSLVLNQLARFSVPAFIFLSGFGLALSYKKESKY LAYLGHRLKKVVPDYFVWYIVYIFLLEDINLSYHDKIISIFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFF LNMGIYILLRYPNIPKSISENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRAN NDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYWLKKYYIENKYIIGSYKFFIIV FFTCFIGGLLISILINKFKKLL
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40802; Mature: 40670
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLTYNSSLVLNQLARFSV CCCEEEECCCEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHHHCC PAFIFLSGFGLALSYKKESKYLAYLGHRLKKVVPDYFVWYIVYIFLLEDINLSYHDKIIS CHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLNMGIYILLRYPNIPKSIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH ENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEE NNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYW CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHH LKKYYIENKYIIGSYKFFIIVFFTCFIGGLLISILINKFKKLL HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GEVIKIKNKRIVSMDLLRALSTIAVILIHVTGTILYNSNNKSLTYNSSLVLNQLARFSV CCEEEECCCEEHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECHHHHHHHHHHHCC PAFIFLSGFGLALSYKKESKYLAYLGHRLKKVVPDYFVWYIVYIFLLEDINLSYHDKIIS CHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IFHGTLYYHFYFVPIIIILYLIFPIFYNFFRTKLALFITFFLNMGIYILLRYPNIPKSIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHH ENLTRESVVSWIFYFVLGVYFCSNYDKIHIFIKKHRNKLLFLLLLSTYILLKDTFLCLRA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEE NNDLDYGTTFIRPSVMLFSIFFILYIMSFNFNNLSFKKIFYMISKHSYTIYLSHPLLLYW CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHH LKKYYIENKYIIGSYKFFIIVFFTCFIGGLLISILINKFKKLL HHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA