| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is resE [H]
Identifier: 148378343
GI number: 148378343
Start: 392421
End: 394274
Strand: Direct
Name: resE [H]
Synonym: CBO0340
Alternate gene names: 148378343
Gene position: 392421-394274 (Clockwise)
Preceding gene: 148378342
Following gene: 148378344
Centisome position: 10.1
GC content: 22.87
Gene sequence:
>1854_bases ATGAGTGAAATTAATAAGAGTAGAGAAAAAAATATATATAGTATAACTTGTACAGTAAAATTAGCATCCTTACTTTTTTC TTCTATAATACTATATAATTATGTATCTCAAAACAATTGTGCTAGCAAAAATAGTTATTATAATGTTTTATTACCAATGA TATTATCGTTAATAACCAGTCTAATATATTTAATTTGGTCTTTTTTTACTGTAAAGACCAGAATGTTTAAAAATATATTA TTTATACAGAGAATAGAAAATATATTTTTTATTTTAATTTTTACAATTTTGATTATAATGTCAGGAAAGTATAATAGTCA TTATAAGTATTTATTTTTATTTATTATAATTACAACTACTATCCAAAGAGGATTAAAGTCTGGTATGATTATTTCGATAA TATCATCTGTTATAATTTTAACTATAGATTTATCTATGGCTAATTATAATTGCATAAATACTTATTTTGAAAATGATTTA ATTCTCTCAGGAGTATTTATTTTAACAGCTGTATCTTTGGGCTATTATGTTAAATTAGGGAATGAGAGTATAAAAGAAAA AAATATTCAATTAGAAGACTTAAACAAAAAATTAAATGAAAAGGATAGTCAGAGAAAATATATAGAGGAGTTGCTTTTTA AAAACGATACTTGCTATAATTTACTTATAGAGAATGCAAGAGATGCTATTATAATACATAGGAAAGATAAGATTGTTTTT GCTAATGAAAGTGCAGCAGAACTGTTAATTTGTAGTAATAATAATGAACTTCAAAATTTAAATATAAATAGTTTTATATT AAAAGAAGAACAAAAGAAAATAAGAAATAAATTAGAATTAGTATATAGAAATAAGAGAGATATAGTATGTGTTGAGCAAG TTATTCAAAATAATAAAAGAAAAAAGATAAATGTTGAAAGTATAAGTACTTATATTATATATAATAATAAACCTGCTATA TTATCTATACTAAGAGATATTACTTCACAAAAACAGGTAGAAAAACTTCAAAAGGATGTAGAAAAAAATATAGAATTGCT AAATGAAAGTAGAGAATATAATAAATTAATAACTGATTTTTTAGCAAACATATCTCATGAATTAAAAACACCTTTAAATG TAATATTTACAGCAGTGCAGATATTAGATTTATATAAAAAAGATGCAGAATCCTATGACAAAAAGGAACAGTATATAAAA GTTATAAAGCAAAACTGCTATAGGCTTATGAGGTTAATTAATAATTTATTGGATACAACTAAGTTAGATTCAGGATATTT AAAACTTAATTTAGTAAATTGTAATATAGTAAATTTAGTAGAAGAGATTACTTTATCAGTTGTATATTATGCAGAAAGCA AAAATATAAATATTATATTTGATACAGATGTTGAAGAAAAGATTATGGCTGTTGATCCAGATAAAATAGAAAGAATAGTA CTAAATTTATTATCTAATGCTATAAAATTTACAGGTAGTGGTGGAAATATATATGTAACTGTTAAAGATTTTGAAGATAA TATTATTATATCTGTAAAAGATACAGGTATAGGTATACCAAGGGACAAAATAGAAAATATATTTGATAGATTTGTTCAAG TAGATAAAACTTTAAGAAGAAATAAGGAAGGCAGCGGCATAGGACTATATTTGGTTAAATCCTTTGTAAATATGCATGAA GGTACTATAGATATTCAAAGTGAGATAGGAAAAGGTAGCGAATTTATAATAAATATACCAGTTAAATTAGTAAAAGAAGA TTTAGAAAAAGAAAATAATGTGTTTTATTCACCAAGCAAAGAATATGTAGATATGGAATTTGCAGATATTTATTCCGAGG TCTCATCCAAATAG
Upstream 100 bases:
>100_bases AAATCATTAAGAAAATAAAGTTTTTAAATAGTGTATAAGGGGGGAGACCTGCTTATACACTATATGTTTATATATTAATA TGACTGTGAGTGTGAGGGAT
Downstream 100 bases:
>100_bases ATTATTTTTATATCTATAATTTTATTTAGTTTTGCATAAACTCCTTTAATCAAATTTAATTTTTATTAGAATCCATTATA TGAATCATTAGTGTTTTTAA
Product: two-component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MSEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNSYYNVLLPMILSLITSLIYLIWSFFTVKTRMFKNIL FIQRIENIFFILIFTILIIMSGKYNSHYKYLFLFIIITTTIQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDL ILSGVFILTAVSLGYYVKLGNESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLLIENARDAIIIHRKDKIVF ANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELVYRNKRDIVCVEQVIQNNKRKKINVESISTYIIYNNKPAI LSILRDITSQKQVEKLQKDVEKNIELLNESREYNKLITDFLANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYIK VIKQNCYRLMRLINNLLDTTKLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINIIFDTDVEEKIMAVDPDKIERIV LNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGIGIPRDKIENIFDRFVQVDKTLRRNKEGSGIGLYLVKSFVNMHE GTIDIQSEIGKGSEFIINIPVKLVKEDLEKENNVFYSPSKEYVDMEFADIYSEVSSK
Sequences:
>Translated_617_residues MSEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNSYYNVLLPMILSLITSLIYLIWSFFTVKTRMFKNIL FIQRIENIFFILIFTILIIMSGKYNSHYKYLFLFIIITTTIQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDL ILSGVFILTAVSLGYYVKLGNESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLLIENARDAIIIHRKDKIVF ANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELVYRNKRDIVCVEQVIQNNKRKKINVESISTYIIYNNKPAI LSILRDITSQKQVEKLQKDVEKNIELLNESREYNKLITDFLANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYIK VIKQNCYRLMRLINNLLDTTKLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINIIFDTDVEEKIMAVDPDKIERIV LNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGIGIPRDKIENIFDRFVQVDKTLRRNKEGSGIGLYLVKSFVNMHE GTIDIQSEIGKGSEFIINIPVKLVKEDLEKENNVFYSPSKEYVDMEFADIYSEVSSK >Mature_616_residues SEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNSYYNVLLPMILSLITSLIYLIWSFFTVKTRMFKNILF IQRIENIFFILIFTILIIMSGKYNSHYKYLFLFIIITTTIQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDLI LSGVFILTAVSLGYYVKLGNESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLLIENARDAIIIHRKDKIVFA NESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELVYRNKRDIVCVEQVIQNNKRKKINVESISTYIIYNNKPAIL SILRDITSQKQVEKLQKDVEKNIELLNESREYNKLITDFLANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYIKV IKQNCYRLMRLINNLLDTTKLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINIIFDTDVEEKIMAVDPDKIERIVL NLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGIGIPRDKIENIFDRFVQVDKTLRRNKEGSGIGLYLVKSFVNMHEG TIDIQSEIGKGSEFIINIPVKLVKEDLEKENNVFYSPSKEYVDMEFADIYSEVSSK
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=302, Percent_Identity=29.1390728476821, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1789149, Length=267, Percent_Identity=29.2134831460674, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI48994928, Length=371, Percent_Identity=26.4150943396226, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788713, Length=261, Percent_Identity=29.1187739463602, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1786600, Length=277, Percent_Identity=26.7148014440433, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1790436, Length=247, Percent_Identity=30.7692307692308, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=29.9180327868852, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=28.6343612334802, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1788393, Length=265, Percent_Identity=23.3962264150943, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788549, Length=399, Percent_Identity=24.5614035087719, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1790300, Length=235, Percent_Identity=26.8085106382979, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87082128, Length=225, Percent_Identity=28, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790861, Length=256, Percent_Identity=26.171875, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790346, Length=249, Percent_Identity=24.4979919678715, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787894, Length=220, Percent_Identity=27.7272727272727, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787374, Length=261, Percent_Identity=28.735632183908, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1789403, Length=250, Percent_Identity=23.2, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1788279, Length=237, Percent_Identity=28.6919831223629, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=116, Percent_Identity=34.4827586206897, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71398; Mature: 71267
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNSYYNVLLPMILSLITS CCCCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LIYLIWSFFTVKTRMFKNILFIQRIENIFFILIFTILIIMSGKYNSHYKYLFLFIIITTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDLILSGVFILTAVSLGYYVKLG HHHHHHCCHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEC NESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLLIENARDAIIIHRKDKIVF CCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCEEEE ANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELVYRNKRDIVCVEQVIQNNKR ECCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KKINVESISTYIIYNNKPAILSILRDITSQKQVEKLQKDVEKNIELLNESREYNKLITDF CEEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYIKVIKQNCYRLMRLINNLLDTT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINIIFDTDVEEKIMAVDPDKIERIV CCCCCEEEEEEECCHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCEEECCHHHHHHHH LNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGIGIPRDKIENIFDRFVQVDKTLRR HHHHHHHHEEECCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC NKEGSGIGLYLVKSFVNMHEGTIDIQSEIGKGSEFIINIPVKLVKEDLEKENNVFYSPSK CCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCCEEEEECCHHHHHHHHHHCCCEEECCCC EYVDMEFADIYSEVSSK CCCCHHHHHHHHHHHCC >Mature Secondary Structure SEINKSREKNIYSITCTVKLASLLFSSIILYNYVSQNNCASKNSYYNVLLPMILSLITS CCCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LIYLIWSFFTVKTRMFKNILFIQRIENIFFILIFTILIIMSGKYNSHYKYLFLFIIITTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH IQRGLKSGMIISIISSVIILTIDLSMANYNCINTYFENDLILSGVFILTAVSLGYYVKLG HHHHHHCCHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEC NESIKEKNIQLEDLNKKLNEKDSQRKYIEELLFKNDTCYNLLIENARDAIIIHRKDKIVF CCHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCEEEE ANESAAELLICSNNNELQNLNINSFILKEEQKKIRNKLELVYRNKRDIVCVEQVIQNNKR ECCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC KKINVESISTYIIYNNKPAILSILRDITSQKQVEKLQKDVEKNIELLNESREYNKLITDF CEEEHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LANISHELKTPLNVIFTAVQILDLYKKDAESYDKKEQYIKVIKQNCYRLMRLINNLLDTT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KLDSGYLKLNLVNCNIVNLVEEITLSVVYYAESKNINIIFDTDVEEKIMAVDPDKIERIV CCCCCEEEEEEECCHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCCEEECCHHHHHHHH LNLLSNAIKFTGSGGNIYVTVKDFEDNIIISVKDTGIGIPRDKIENIFDRFVQVDKTLRR HHHHHHHHEEECCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC NKEGSGIGLYLVKSFVNMHEGTIDIQSEIGKGSEFIINIPVKLVKEDLEKENNVFYSPSK CCCCCCCHHHHHHHHHHHCCCCEEEHHHCCCCCEEEEECCHHHHHHHHHHCCCEEECCCC EYVDMEFADIYSEVSSK CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]