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The map label for this gene is ygaK [H]

Identifier: 148378268

GI number: 148378268

Start: 313753

End: 314847

Strand: Reverse

Name: ygaK [H]

Synonym: CBO0266

Alternate gene names: 148378268

Gene position: 314847-313753 (Counterclockwise)

Preceding gene: 148378271

Following gene: 148378259

Centisome position: 8.1

GC content: 30.41

Gene sequence:

>1095_bases
GTGATAAAATTGATCGAAGTGATTACTCCTACAAGTAATTATTATGATGATGCCAGACAAGTCTGGAATAGAGCTATTGA
TAAATATCCAGCTGCCATAGCCTATTGCAAAACTTATGAAGACGTAAAAAAAGCTATATTATTTGCTAGAAAAAATAATT
TTAAAATAAGAGTTCGCTGTGGTGGTCATAATTATGAAGGTTTTTCAATAGCTGATGATGCTTTAATTATTGATATTAGC
AATTTAAATAAAATACAAATAAACTATGAATGCAATACTGTTACTGTTGGAAGTGGAGCTTTTTTAGGACAAGTTTATAA
TTTTCTTGGAGCAAGTGAATATCCATTTCCAGGTGGTTCATGTCCTACTGTTGGAATTAGTGGTGTAGTACTTGGAGGTG
GATGGGGATATTCATCTAGATATTTTGGCTTAACTTGTGATAGCTTACTTGAACTCAAGATGATTGATTATAGGGGTTGT
TTATTAACTGCAAATAAGAATATTAATTCTGATTTATATTGGGCATGTAGAGGTGGTGGCGGTGGAAATTTTCGTATAGT
AGTATCAATGACATTTAAACTTCCTCCTAAGGTAGATAAAGTAGCTGTCTTTAATATTTACTATACTAATCCAAGTAAAA
ATACTCAACTTAGATTTCTAGATACTTGGCAGAATTGGATTACTACAACTTCTAATAAAATTAATATGAAAGGTAGCATA
GTCAACTCAGCAACTGATGGTGTAAATATTATTTGTACAGGGCTCCTTTATGGTACACCTAAAGAATTATATAAACTGTT
AGTCCCTTTTAGTAAAATTGAAGGCTACAAATTAAGTTATAGATATACTTCTTTTTTACAAGCTGCCGAAATTATAGCCT
CTGTATATCCTCCATATGAATACTTTATATCTTATGGTAGATTCGTATCAGAGACCTATTCTTATGAAACATTAAAAAAC
CTAATTAATATAATTAATGAAGAAAGACCTAATGGCTCTACTACTACCGAATTAAATGTATATGGGCTTGGTGGACAAGT
TAGCAAAATTAATAAAAAAGATACTGCTTTTATTATAGAAATAGTAATTATATAA

Upstream 100 bases:

>100_bases
ATTAATATCTTTTTCTAATGAAAATTTTATTATAATCTAAATTTTGTCATCTTTTTTCTCCTACCTTTATAAGATAAATT
AAAAACTATTTTTAAAGCTG

Downstream 100 bases:

>100_bases
TATTACTAGTGGTTCTTATATTAATTTCCCTTATTACCCTTTACCAAATTATCTTTATGATTATTATGGTGGGAATGTTC
AAAGACTTAAATGTATAAAA

Product: FAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDIS
NLNKIQINYECNTVTVGSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGC
LLTANKNINSDLYWACRGGGGGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDTWQNWITTTSNKINMKGSI
VNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKN
LINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFIIEIVII

Sequences:

>Translated_364_residues
MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDIS
NLNKIQINYECNTVTVGSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGC
LLTANKNINSDLYWACRGGGGGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDTWQNWITTTSNKINMKGSI
VNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKN
LINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFIIEIVII
>Mature_364_residues
MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKAILFARKNNFKIRVRCGGHNYEGFSIADDALIIDIS
NLNKIQINYECNTVTVGSGAFLGQVYNFLGASEYPFPGGSCPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGC
LLTANKNINSDLYWACRGGGGGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDTWQNWITTTSNKINMKGSI
VNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYRYTSFLQAAEIIASVYPPYEYFISYGRFVSETYSYETLKN
LINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFIIEIVII

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 40738; Mature: 40738

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKAILFARKNNFKIRVRC
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCEEEEEEE
GGHNYEGFSIADDALIIDISNLNKIQINYECNTVTVGSGAFLGQVYNFLGASEYPFPGGS
CCCCCCCCEEECCEEEEEECCCEEEEEEEEECEEEECCCHHHHHHHHHHCCCCCCCCCCC
CPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLTANKNINSDLYWACRGGG
CCCCCCCEEEEECCCCCCCEEECCCHHHHHEEEEEEECCEEEEECCCCCCCEEEEEECCC
GGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDTWQNWITTTSNKINMKGSI
CCCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEECHHHHHCCCCCEEEEEEEE
VNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYRYTSFLQAAEIIASVYPPYE
ECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHH
YFISYGRFVSETYSYETLKNLINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFIIE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEE
IVII
EEEC
>Mature Secondary Structure
MIKLIEVITPTSNYYDDARQVWNRAIDKYPAAIAYCKTYEDVKKAILFARKNNFKIRVRC
CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCEEEEEEE
GGHNYEGFSIADDALIIDISNLNKIQINYECNTVTVGSGAFLGQVYNFLGASEYPFPGGS
CCCCCCCCEEECCEEEEEECCCEEEEEEEEECEEEECCCHHHHHHHHHHCCCCCCCCCCC
CPTVGISGVVLGGGWGYSSRYFGLTCDSLLELKMIDYRGCLLTANKNINSDLYWACRGGG
CCCCCCCEEEEECCCCCCCEEECCCHHHHHEEEEEEECCEEEEECCCCCCCEEEEEECCC
GGNFRIVVSMTFKLPPKVDKVAVFNIYYTNPSKNTQLRFLDTWQNWITTTSNKINMKGSI
CCCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCEEEEEECHHHHHCCCCCEEEEEEEE
VNSATDGVNIICTGLLYGTPKELYKLLVPFSKIEGYKLSYRYTSFLQAAEIIASVYPPYE
ECCCCCCCEEEEEEEECCCHHHHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHCCCHH
YFISYGRFVSETYSYETLKNLINIINEERPNGSTTTELNVYGLGGQVSKINKKDTAFIIE
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEE
IVII
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]