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The map label for this gene is parB [H]

Identifier: 148361204

GI number: 148361204

Start: 3442106

End: 3443005

Strand: Direct

Name: parB [H]

Synonym: LPC_3178

Alternate gene names: 148361204

Gene position: 3442106-3443005 (Clockwise)

Preceding gene: 148361203

Following gene: 148361205

Centisome position: 96.24

GC content: 40.22

Gene sequence:

>900_bases
ATGACAGTAAAACGCAGTAGTTTAGGCCGTAATTTATCTGCTTTATTAAGTCAATCAAGCAGCTCTTTATTAGCGAATGA
GCAACCCCAAACAGAACAGCAACTCAAACTCGCAGTGACTTGTTTGCAGCCAGGCAAGTATCAGCCTCGTGGAGGAATGG
AAGAAGCCCCTCTCAATGAACTTGCGCAATCCATTAAAAAGCAAGGCGTATTACAGCCCTTACTGGTTCGTGAGTTAGAT
AATGGAAAGTATGAAATCATCGCAGGAGAAAGACGCTGGCGTGCCAGCCAACTGGCAGGTCTTACAGAAGTTCCTGTTAT
CCTTAAACAAGTAGATGATGAAACGGCCATGGCAATGGCGCTGGTTGAAAACTTGCAACGTGAAGATTTAAATGCCATGG
ATCAAGCAAGGGCCATGTATAGACTCACCAATGAATTTGCTCTTACCCATCAGCAAGTAGCCGATCTCTTATGCAAATCC
AGAACCGCAGTAAGCAATTTTCTTCGTTTGCTTTCTCTTTCAACGCCAGTAAAGAAGCTTTTGGAAAATGGGGACATAGA
CATGGGTCATGCCAGAGCGTTACTTGCTTTGGATGAAGAGCAGCAAAGTCAAGTCGCTCAGTTGATCATTGCTAAAAATT
TATCGGTCAGAGAAACGGAGCAACTGGTTGAGCGAGTAAAAAACGGAAAACCGGAATTAAAAACCCATCACAAAGACAAT
CCTATGTTTAAAGAACAGTTAAACTCTTTAGCAAAACATTTGCAGACTAAAATCAAATTAAAACAAGGGAAAACCGGTAA
AGGAACATTGATTATTCATTATGAAAACGATCATAATTTGCAAAAAATTATTGAGCAATTATTAGGTAACTTCCCTGAAG
TTTTTTTAGACAAGATTTAA

Upstream 100 bases:

>100_bases
TTGCAATATGATAAATCCTCACCGGGAGCAGCAGCTTATATGGTTCTCGCTGCCGAAGTGATAAGTAAACAAACTGTAGC
CAGTTAATTTGGGGTAAGTA

Downstream 100 bases:

>100_bases
TCTTGAATTGAGCACGGATTTTTCAATTTCACTCCGATCTGCCCCCTCTCCCGCACCAGGAGCTTTAATAGTATGATGAT
GCCTTTCGCGGGAGAGGGTT

Product: chromosome partitioning protein ParB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTVKRSSLGRNLSALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLNELAQSIKKQGVLQPLLVRELD
NGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAMALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKS
RTAVSNFLRLLSLSTPVKKLLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKDN
PMFKEQLNSLAKHLQTKIKLKQGKTGKGTLIIHYENDHNLQKIIEQLLGNFPEVFLDKI

Sequences:

>Translated_299_residues
MTVKRSSLGRNLSALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLNELAQSIKKQGVLQPLLVRELD
NGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAMALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKS
RTAVSNFLRLLSLSTPVKKLLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKDN
PMFKEQLNSLAKHLQTKIKLKQGKTGKGTLIIHYENDHNLQKIIEQLLGNFPEVFLDKI
>Mature_298_residues
TVKRSSLGRNLSALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLNELAQSIKKQGVLQPLLVRELDN
GKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAMALVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSR
TAVSNFLRLLSLSTPVKKLLENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKDNP
MFKEQLNSLAKHLQTKIKLKQGKTGKGTLIIHYENDHNLQKIIEQLLGNFPEVFLDKI

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33598; Mature: 33467

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKRSSLGRNLSALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLNE
CCCCHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHH
LAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAMA
HHHHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKDN
HHCCCCCCCHHHHHHEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PMFKEQLNSLAKHLQTKIKLKQGKTGKGTLIIHYENDHNLQKIIEQLLGNFPEVFLDKI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
TVKRSSLGRNLSALLSQSSSSLLANEQPQTEQQLKLAVTCLQPGKYQPRGGMEEAPLNE
CCCHHHHCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCHHH
LAQSIKKQGVLQPLLVRELDNGKYEIIAGERRWRASQLAGLTEVPVILKQVDDETAMAMA
HHHHHHHCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHH
LVENLQREDLNAMDQARAMYRLTNEFALTHQQVADLLCKSRTAVSNFLRLLSLSTPVKKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LENGDIDMGHARALLALDEEQQSQVAQLIIAKNLSVRETEQLVERVKNGKPELKTHHKDN
HHCCCCCCCHHHHHHEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PMFKEQLNSLAKHLQTKIKLKQGKTGKGTLIIHYENDHNLQKIIEQLLGNFPEVFLDKI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]