Click here to switch to the map view.

The map label for this gene is gidB [H]

Identifier: 148361202

GI number: 148361202

Start: 3440693

End: 3441319

Strand: Direct

Name: gidB [H]

Synonym: LPC_3176

Alternate gene names: 148361202

Gene position: 3440693-3441319 (Clockwise)

Preceding gene: 148361201

Following gene: 148361203

Centisome position: 96.2

GC content: 40.99

Gene sequence:

>627_bases
ATGATAGGTAATACGAAAATAAAATCATTGCTTGAAGAGGGTCTGACTGCGTTTCAACTGGATGCCATCGGCGACCTCTT
GCTTGATTTTTTGCTTCTGCTCAATAAATGGAATAAAACATATAACCTCACCGCAATACGTGATATTGAAACCATGGTCA
GCAAGCACCTGTTCGACAGTCTGGCTATTTTACCCTGGATAAAGGGAAACCATATTATCGATGTGGGTACTGGCCCGGGT
TTACCTGGCATCCCTTTGGCTATTGCCAAACCTGACTTACAATTTGTATTATTGGACAGTAATGGGAAAAAAATTAGCTT
TCTCAATGAAGTAAAACGTCAACTCAATATAAAGAACATTGAACCAATACAAATTCGAGTAGAGAACTACCACCCAAACC
AAGGTTTTGATACAGTAATAAGCAGAGCATTTAGCAGTCTCGAACAAATGATAAAATGGACTGAACATCTTGTCGCTCAG
GATGGTTTGTGGTTAGCCATGAAAGGGCGGTTTCCGGATACTGAATTGGTCCCGATTCATCAAACATATCGAGTTGAGAG
ATATGCTGTCCCGGGTATCGAAGGAGAGCGTTGCTGCGTGCTTATTAACAACACGAACAAGGAATAA

Upstream 100 bases:

>100_bases
TTAAACCAACTTCTTTGGCTCAAGCCGGGCGGATTTCTGGCGTAACACCTGCCGCTCTGTCTCTTTTACTTGTTCACCTG
AAAAAGAGTCGGCTTCCAGT

Downstream 100 bases:

>100_bases
TTATGGCGAAAGTCATAGCCATTGCCAACCAAAAAGGTGGAGTAGGTAAAACAACCACAGCCATCAATTTATCTGCATCT
CTTGCCGCATCCAAACAGCA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIGNTKIKSLLEEGLTAFQLDAIGDLLLDFLLLLNKWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHIIDVGTGPG
LPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMIKWTEHLVAQ
DGLWLAMKGRFPDTELVPIHQTYRVERYAVPGIEGERCCVLINNTNKE

Sequences:

>Translated_208_residues
MIGNTKIKSLLEEGLTAFQLDAIGDLLLDFLLLLNKWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHIIDVGTGPG
LPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMIKWTEHLVAQ
DGLWLAMKGRFPDTELVPIHQTYRVERYAVPGIEGERCCVLINNTNKE
>Mature_208_residues
MIGNTKIKSLLEEGLTAFQLDAIGDLLLDFLLLLNKWNKTYNLTAIRDIETMVSKHLFDSLAILPWIKGNHIIDVGTGPG
LPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNIEPIQIRVENYHPNQGFDTVISRAFSSLEQMIKWTEHLVAQ
DGLWLAMKGRFPDTELVPIHQTYRVERYAVPGIEGERCCVLINNTNKE

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=179, Percent_Identity=46.3687150837989, Blast_Score=185, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 23546; Mature: 23546

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNTKIKSLLEEGLTAFQLDAIGDLLLDFLLLLNKWNKTYNLTAIRDIETMVSKHLFDS
CCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH
LAILPWIKGNHIIDVGTGPGLPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNI
HHHCCEECCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHHHHHHCCCCCC
EPIQIRVENYHPNQGFDTVISRAFSSLEQMIKWTEHLVAQDGLWLAMKGRFPDTELVPIH
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECH
QTYRVERYAVPGIEGERCCVLINNTNKE
HHHEEEEEECCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MIGNTKIKSLLEEGLTAFQLDAIGDLLLDFLLLLNKWNKTYNLTAIRDIETMVSKHLFDS
CCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHH
LAILPWIKGNHIIDVGTGPGLPGIPLAIAKPDLQFVLLDSNGKKISFLNEVKRQLNIKNI
HHHCCEECCCEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHHHHHHCCCCCC
EPIQIRVENYHPNQGFDTVISRAFSSLEQMIKWTEHLVAQDGLWLAMKGRFPDTELVPIH
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECH
QTYRVERYAVPGIEGERCCVLINNTNKE
HHHEEEEEECCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA