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The map label for this gene is tex [H]

Identifier: 148361144

GI number: 148361144

Start: 3374245

End: 3376614

Strand: Reverse

Name: tex [H]

Synonym: LPC_3118

Alternate gene names: 148361144

Gene position: 3376614-3374245 (Counterclockwise)

Preceding gene: 148361145

Following gene: 148361143

Centisome position: 94.41

GC content: 41.27

Gene sequence:

>2370_bases
ATGGCAGAAGTGATGTTGGCGTCAGCCGCAATTATTGCAGATGAACTTAAGGTCAAAGTATCGCAGGTAGAAACTGCTAT
TCGGCTGTTAGATGAAGGAGCAACAGTACCTTTTATTGCGCGTTATCGCAAAGAAGCAACTGGAGGACTTGACGATGTGC
AATTGCGGTTTCTTGCGGAAAGGCTAATTTATTTGCGTGAATTGGATGAGAGACGAACAGTCATTTTGCAATCCATTCGT
GAACAAGAAAAATTAACACCGGAATTGGAACAAAGCATATTAGCTGCTGAAACTAAAACACGCCTGGAAGACTTGTACTT
ACCCTATAGGCCTAAGCGTCGTACAAAAGCGCAAATTGCTATTGAAGCAGGATTAGAGCCATTAGCTCATGCTTTATGGA
AAGACCCTGCTTTGGATCCCGAAGAACAGGCTTCCCAATTTATAAATAGCGAAGCAGGGATCGAAAATACCCAGGCCGCA
CTGGATGGTGCGCGGCATATTTTAATGGAGCATTTTGCTGAAGACGCCGAGTTAATTAATGAATTACGAGAGTATTTATG
GCAACACGGAATAGTCAAATCAGTAGGAAACAGTACTAAAAAAGATCAAGCGAATAAATTTTCTGATTACTTTGATTATT
CGGAAGCGATTAAAAAAATTCCATCTCATCGGGCACTGGCCTTGTTCCGGGGGCGGCGTGAAGGAATTCTGCAAGTAAGT
CTGGTTTTACCTGATCAGGATGCCAATTATGGAGAGAATAAGGTTGCGACTTACTTTAATGTCACTGACAGGCAAAGAAA
AGCTGATGGTTGGCTTATAGATACGGTCAGGATGACTTGGAAAATTAAGCTATTTACCAAGCTGGAGCTTGAGTTATTAA
CTCGTCTGCGCGAAATAGCAGATGAGGAAGCCATTAAAGTGTTTTCCAAAAATTTACGTGATCTGTTGCTGGCTGCTCCG
GCAGGTCCTCAAGTAACGATAGGTCTTGACCCGGGAATTAGAACGGGTGTTAAAGTGGTTGTCGTGGATGCTACAGGTAA
GCTGTTGGATTACTCTGTTATTTTTCCATTTGCTCCTCAAAATGAATGGCATCAATCCATTGCGGATTTGGCAAAGCTTG
CTGCGAAATATCAGGTTAATTTAATCAGCATAGGAAATGGCACCGGTTCTCGGGAAACAGAGCGGTTGGTAGCTGATTTA
ATTAAAATGTACCCTGATTTGAAATTAACAAAAATGATTGTCAGTGAAGCCGGGGCATCTGTTTATTCCGCATCTGAAAT
TGCAGCCAATGAATTTCCTGATTTGGATGTTTCCCTAAGGGGCGCTGTATCTATTGCACGAAGATTGCAAGATCCCTTGG
CAGAACTGGTAAAAATTGAAGCCAAATCAATAGGTGTTGGCCAGTATCAACATGATGTGAACCAGGCAAAGTTGGCGCGT
TGCCTGGATGGTGTTGTCGAGGATTGTGTGAATGCTGTTGGCGTAGATATTAATACGGCCTCTGCAGCTTTGCTATCCCA
TATTTCTGGATTGAATGATACTTTAGCTAAAAATATTGTGCAATTTCGCGATGAACATGGTGCTTTCACAAACAGAAATC
AATTAAAAAGTATCCATCGCATGGGAGAAAAGGCTTTTCAGCAAGCAGCCGGCTTTTTGCGCATTATGAATGGAGATAAT
GCTTTAGATGCCTCTTGTGTTCATCCTGAAGCCTATCCTTTAGTGGAAAAAATTATTTCAGATAAAAAAGTTAGTATTAA
GGAAATAATCGGCAATAGAGAATTATTGCAGAGTATTAACGCGGAACAATATGTGGATGAGAATTTTGGTTTGCCAACAA
TAAGAGATGTTTTACGTGAATTGGAGAAACCGGGGCGAGATCCAAGACCAGAATTCAGAACCGCTCAATTTAAGGAAGGT
GTTGAGGACATTAAAGATTTGGAACAAGGAATGGTTCTGGAAGGTGTTGTAAGTAATGTGACTAATTTTGGTGCCTTTGT
TGATATTGGCGTTCACCAGGATGGGTTGGTACATATTTCAGCAATGACCAATCGCTTTATTACAGATCCTCGTTCTGTTG
TTAAAGCCGGTGATATTGTAAAAGTTAAAGTGGTTGAAGTGGATAAAGAACGCCGAAGGATTGGTTTAAGTATGAAGCTG
AATGATGAGCAGGCTCCTGCTGTATTGCAGAAAGCTAATAAACCACAGCCGGCTAGAAAGCAAGCGGAACAAAAGCAGCC
TGAATTTAAGAAGAAGCAAGAACATAAGAAAAAACCAGATAAGATAAAAAAACCGGAGCCAGTCAAAAAAACCGTATTTA
ATACAGCCATGGCCGATGCTTTAGCCAAACTAAAACGTGGTGGAGAATAG

Upstream 100 bases:

>100_bases
AGGACAATTTGTTTATATATTAGCTTAATTTCTATATCGCATTATAGTATGTGATGAGTATATAATGAGACGATTTTTAT
CATGTTTTACGGGGATATGA

Downstream 100 bases:

>100_bases
GGATGCAAACACCTAAAGGAGAGTTGACTATCCAAACTTTGGCCATGCCTTTAAATACTAATGCCAATGGCGATATATTT
GGCGGATGGATAGTCTCCCA

Product: transcription accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIR
EQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAA
LDGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
LVLPDQDANYGENKVATYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAP
AGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADL
IKMYPDLKLTKMIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHRMGEKAFQQAAGFLRIMNGDN
ALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDENFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEG
VEDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKPEPVKKTVFNTAMADALAKLKRGGE

Sequences:

>Translated_789_residues
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIR
EQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAA
LDGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
LVLPDQDANYGENKVATYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAP
AGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADL
IKMYPDLKLTKMIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHRMGEKAFQQAAGFLRIMNGDN
ALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDENFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEG
VEDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKPEPVKKTVFNTAMADALAKLKRGGE
>Mature_788_residues
AEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAERLIYLRELDERRTVILQSIRE
QEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIAIEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAAL
DGARHILMEHFAEDAELINELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVSL
VLPDQDANYGENKVATYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIADEEAIKVFSKNLRDLLLAAPA
GPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQNEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLI
KMYPDLKLTKMIVSEAGASVYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLARC
LDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHRMGEKAFQQAAGFLRIMNGDNA
LDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSINAEQYVDENFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGV
EDIKDLEQGMVLEGVVSNVTNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKLN
DEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKPEPVKKTVFNTAMADALAKLKRGGE

Specific function: Transcription accessory protein. Exact function not known [H]

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=773, Percent_Identity=34.0232858990944, Blast_Score=372, Evalue=1e-102,
Organism=Homo sapiens, GI27597090, Length=732, Percent_Identity=21.0382513661202, Blast_Score=95, Evalue=3e-19,
Organism=Escherichia coli, GI87082262, Length=719, Percent_Identity=60.0834492350487, Blast_Score=876, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=76, Percent_Identity=42.1052631578947, Blast_Score=71, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=718, Percent_Identity=29.2479108635098, Blast_Score=239, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17552892, Length=622, Percent_Identity=22.1864951768489, Blast_Score=80, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6321552, Length=568, Percent_Identity=22.5352112676056, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI62484314, Length=773, Percent_Identity=31.4359637774903, Blast_Score=352, Evalue=7e-97,
Organism=Drosophila melanogaster, GI24640080, Length=563, Percent_Identity=21.6696269982238, Blast_Score=80, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 88087; Mature: 87956

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RLIYLRELDERRTVILQSIREQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELIN
HHHCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
HHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEE
LVLPDQDANYGENKVATYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIA
EEECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DEEAIKVFSKNLRDLLLAAPAGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLIKMYPDLKLTKMIVSEAGAS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGEKAFQQAAGFLRIMNGDNALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSIN
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCC
AEQYVDENFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGVEDIKDLEQGMVLEGVVSNV
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
HHCCCEEEECCCCCCCEEEEHHHHHHHCCCHHHHCCCCEEEEEEEECCHHHHHCCCEEEE
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKPEPVKKTVFNTAMADA
CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LAKLKRGGE
HHHHHCCCC
>Mature Secondary Structure 
AEVMLASAAIIADELKVKVSQVETAIRLLDEGATVPFIARYRKEATGGLDDVQLRFLAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
RLIYLRELDERRTVILQSIREQEKLTPELEQSILAAETKTRLEDLYLPYRPKRRTKAQIA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IEAGLEPLAHALWKDPALDPEEQASQFINSEAGIENTQAALDGARHILMEHFAEDAELIN
HHHCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELREYLWQHGIVKSVGNSTKKDQANKFSDYFDYSEAIKKIPSHRALALFRGRREGILQVS
HHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEE
LVLPDQDANYGENKVATYFNVTDRQRKADGWLIDTVRMTWKIKLFTKLELELLTRLREIA
EEECCCCCCCCCCCEEEEEECCHHHHCCCCCEEEEEEEEEEEEEHHHHHHHHHHHHHHHH
DEEAIKVFSKNLRDLLLAAPAGPQVTIGLDPGIRTGVKVVVVDATGKLLDYSVIFPFAPQ
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
NEWHQSIADLAKLAAKYQVNLISIGNGTGSRETERLVADLIKMYPDLKLTKMIVSEAGAS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCH
VYSASEIAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEAKSIGVGQYQHDVNQAKLAR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CLDGVVEDCVNAVGVDINTASAALLSHISGLNDTLAKNIVQFRDEHGAFTNRNQLKSIHR
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
MGEKAFQQAAGFLRIMNGDNALDASCVHPEAYPLVEKIISDKKVSIKEIIGNRELLQSIN
HHHHHHHHHHCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCC
AEQYVDENFGLPTIRDVLRELEKPGRDPRPEFRTAQFKEGVEDIKDLEQGMVLEGVVSNV
HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
TNFGAFVDIGVHQDGLVHISAMTNRFITDPRSVVKAGDIVKVKVVEVDKERRRIGLSMKL
HHCCCEEEECCCCCCCEEEEHHHHHHHCCCHHHHCCCCEEEEEEEECCHHHHHCCCEEEE
NDEQAPAVLQKANKPQPARKQAEQKQPEFKKKQEHKKKPDKIKKPEPVKKTVFNTAMADA
CCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LAKLKRGGE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8755871; 12910271 [H]